Gm55968 Gene Detail

Summary

• Symbol
  Gm55968
• Name
  predicted gene, 55968

• Feature Type
  miRNA gene
• IDs
  MGI:6848396
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:112318684-112318790 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  72 from dbSNP Build 142
• Strain Annotations
  52

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848396	miRNA gene	Chr9:112318684-112318790 (+)
129S1/SvImJ	ENSMUSG00200039199	miRNA gene	Chr1:82648390-82648491 (+)
129S1/SvImJ	ENSMUSG00200008780	miRNA gene	Chr2:108444648-108444754 (+)
129S1/SvImJ	ENSMUSG00200045606	miRNA gene	Chr9:109409226-109409332 (+)
A/J	ENSMUSG00195045632	miRNA gene	Chr9:108728780-108728878 (+)
AKR/J	ENSMUSG00220002701	miRNA gene	Chr5:37792926-37793032 (-)
AKR/J	ENSMUSG00220031922	miRNA gene	Chr9:109037802-109037908 (+)
AKR/J	ENSMUSG00220006589	miRNA gene	Chr6:52776542-52776643 (+)
AKR/J	ENSMUSG00220014348	miRNA gene	Chr2:15593418-15593725 (-)
BALB/cJ	ENSMUSG00180036097	miRNA gene	Chr9:109156320-109156418 (+)
C3H/HeJ	ENSMUSG00175046531	miRNA gene	Chr9:109372059-109372157 (+)
C57BL/6NJ	ENSMUSG00215041350	miRNA gene	Chr9:109262421-109262527 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210005679	miRNA gene	Chr5:38525644-38525750 (-)
CBA/J	ENSMUSG00210042140	miRNA gene	Chr2:108588251-108588352 (+)
CBA/J	ENSMUSG00210034971	miRNA gene	Chr6:53179308-53179409 (+)
CBA/J	ENSMUSG00210045290	miRNA gene	Chr9:109084648-109084754 (+)
DBA/2J	ENSMUSG00185018365	miRNA gene	Chr1:85603315-85603418 (-)
DBA/2J	ENSMUSG00185018344	miRNA gene	Chr1:85410583-85410689 (-)
DBA/2J	ENSMUSG00185018274	miRNA gene	Chr1:84920029-84920135 (-)
DBA/2J	ENSMUSG00185018255	miRNA gene	Chr1:84737458-84737564 (-)
DBA/2J	ENSMUSG00185018173	miRNA gene	Chr1:84084094-84084200 (-)
DBA/2J	ENSMUSG00185018127	miRNA gene	Chr1:83798191-83798297 (-)
DBA/2J	ENSMUSG00185018082	miRNA gene	Chr1:83624033-83624139 (+)
DBA/2J	ENSMUSG00185041396	miRNA gene	Chr2:108310580-108310681 (+)
DBA/2J	ENSMUSG00185018442	miRNA gene	Chr1:86000472-86000578 (+)
DBA/2J	ENSMUSG00185044558	miRNA gene	Chr9:109420544-109420650 (+)
FVB/NJ	ENSMUSG00205050312	miRNA gene	Chr9:109372471-109372569 (+)
JF1/MsJ	ENSUMUG00000055691	miRNA gene	Chr9:109185516-109185622 (+)
JF1/MsJ	ENSUMUG00000048865	miRNA gene	Chr9:91900259-91900360 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190050880	miRNA gene	Chr9:109008121-109008227 (+)
NOD/ShiLtJ	ENSMUSG00190009163	miRNA gene	Chr6:53092179-53092280 (+)
NOD/ShiLtJ	ENSMUSG00190016802	miRNA gene	Chr2:108529631-108529732 (+)
NOD/ShiLtJ	ENSMUSG00190002855	miRNA gene	Chr1:47498127-47498230 (-)
NOD/ShiLtJ	ENSMUSG00190003509	miRNA gene	Chr5:37600361-37600467 (-)
NZO/HlLtJ	ENSMUSG00225010236	miRNA gene	Chr1:51668925-51669028 (-)
NZO/HlLtJ	ENSMUSG00225005209	miRNA gene	Chr1:86805415-86805521 (+)
NZO/HlLtJ	ENSMUSG00225024693	miRNA gene	Chr9:109790671-109790777 (+)
NZO/HlLtJ	ENSMUSG00225005268	miRNA gene	Chr1:88101293-88101399 (-)
NZO/HlLtJ	ENSMUSG00225005369	miRNA gene	Chr1:89181624-89181730 (+)
NZO/HlLtJ	ENSMUSG00225005310	miRNA gene	Chr1:88591825-88591931 (-)
NZO/HlLtJ	ENSMUSG00225005322	miRNA gene	Chr1:88784524-88784627 (-)
NZO/HlLtJ	ENSMUSG00225005262	miRNA gene	Chr1:87918743-87918849 (-)
NZO/HlLtJ	ENSMUSG00225005227	miRNA gene	Chr1:87265451-87265557 (-)
NZO/HlLtJ	ENSMUSG00225005218	miRNA gene	Chr1:86979573-86979679 (-)
PWK/PhJ	ENSLUMG00010012332	miRNA gene	Chr16:51773305-51773411 (-)
PWK/PhJ	ENSLUMG00010030267	miRNA gene	Chr9:91895882-91895988 (-)
PWK/PhJ	ENSLUMG00010025288	miRNA gene	Chr2:93801827-93801928 (+)
PWK/PhJ	ENSLUMG00010020521	miRNA gene	Chr5:5535593-5535694 (+)
PWK/PhJ	ENSLUMG00010032922	miRNA gene	Chr8:16006302-16006408 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005021828	miRNA gene	Chr6:53431101-53431202 (+)
WSB/EiJ	ENSIUOG00005034278	miRNA gene	Chr2:108205166-108205267 (+)
WSB/EiJ	ENSIUOG00005048751	miRNA gene	Chr9:108487523-108487629 (+)

Homology

• Gene Tree
  Gm55968
  

Sequences &
Gene Models

• All Sequences
  54

• Ensembl
  ENSMUSG00002075622 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075622	Ensembl Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	ENSMUST00020182617	Ensembl | MGI Sequence Detail	107	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;