Gm55963 Gene Detail

Summary

• Symbol
  Gm55963
• Name
  predicted gene, 55963

• Feature Type
  miRNA gene
• IDs
  MGI:6848386
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:25373370-25373462 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848386	miRNA gene	Chr5:25373370-25373462 (-)
129S1/SvImJ	ENSMUSG00200014987	miRNA gene	Chr5:20984858-20984925 (-)
A/J	ENSMUSG00195049509	miRNA gene	Chr5:20446416-20446483 (-)
AKR/J	ENSMUSG00220009399	miRNA gene	Chr5:20539919-20539986 (-)
BALB/cJ	ENSMUSG00180026867	miRNA gene	Chr5:20319095-20319187 (-)
C3H/HeJ	ENSMUSG00175049841	miRNA gene	Chr5:22244574-22244641 (-)
C57BL/6NJ	ENSMUSG00215041503	miRNA gene	Chr5:20892585-20892677 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005026060	miRNA gene	Chr5:20454708-20454800 (-)
CBA/J	ENSMUSG00210049531	miRNA gene	Chr5:21283854-21283921 (-)
DBA/2J	ENSMUSG00185039601	miRNA gene	Chr5:22816183-22816250 (-)
FVB/NJ	ENSMUSG00205032494	miRNA gene	Chr5:20091813-20091907 (-)
JF1/MsJ	ENSUMUG00000007701	miRNA gene	Chr5:27377282-27377374 (-)
LP/J	ENSMUSG00230025960	miRNA gene	Chr5:27266811-27266878 (-)
NOD/ShiLtJ	ENSMUSG00190005081	miRNA gene	Chr5:20373232-20373299 (-)
NZO/HlLtJ	ENSMUSG00225020800	miRNA gene	Chr5:32669606-32669673 (-)
PWK/PhJ	ENSLUMG00010048975	miRNA gene	Chr5:20416226-20416305 (-)
SPRET/EiJ	ENSMSPG00010045368	miRNA gene	Chr5:21284743-21284837 (-)
WSB/EiJ	ENSIUOG00005045057	miRNA gene	Chr5:23183046-23183113 (-)

Homology

• Gene Tree
  Gm55963
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076426 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076426	Ensembl Gene Model | MGI Sequence Detail	93	C57BL/6J
transcript	ENSMUST00020182015	Ensembl | MGI Sequence Detail	93	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;