Gm55958 Gene Detail

Summary

• Symbol
  Gm55958
• Name
  predicted gene, 55958

• Feature Type
  rRNA gene
• IDs
  MGI:6848376
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:67944161-67944286 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  89 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848376	rRNA gene	Chr11:67944161-67944286 (+)
129S1/SvImJ	ENSMUSG00200049971	rRNA gene	Chr11:64886991-64887116 (+)
A/J	ENSMUSG00195052581	rRNA gene	Chr11:64906420-64906545 (+)
AKR/J	ENSMUSG00220054252	rRNA gene	Chr11:65022677-65022802 (+)
BALB/cJ	ENSMUSG00180053942	rRNA gene	Chr11:64987138-64987263 (+)
C3H/HeJ	ENSMUSG00175054476	rRNA gene	Chr11:64937519-64937644 (+)
C57BL/6NJ	ENSMUSG00215055120	rRNA gene	Chr11:64712742-64712867 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005053686	rRNA gene	Chr11:64458929-64459054 (+)
CBA/J	ENSMUSG00210054420	rRNA gene	Chr11:64791627-64791752 (+)
DBA/2J	ENSMUSG00185056873	rRNA gene	Chr11:64985858-64985983 (+)
FVB/NJ	ENSMUSG00205053941	rRNA gene	Chr11:64881975-64882100 (+)
JF1/MsJ	ENSUMUG00000057291	rRNA gene	Chr11:65374101-65374226 (+)
LP/J	ENSMUSG00230053883	rRNA gene	Chr11:66097402-66097527 (+)
NOD/ShiLtJ	ENSMUSG00190054154	rRNA gene	Chr11:65019701-65019826 (+)
NZO/HlLtJ	ENSMUSG00225047693	rRNA gene	Chr11:68274955-68275080 (+)
PWK/PhJ	ENSLUMG00010053604	rRNA gene	Chr11:64892465-64892590 (+)
SPRET/EiJ	ENSMSPG00010049579	rRNA gene	Chr11:65623068-65623199 (+)
WSB/EiJ	ENSIUOG00005052563	rRNA gene	Chr11:64911520-64911645 (+)

Homology

• Gene Tree
  Gm55958
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076000 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076000	Ensembl Gene Model | MGI Sequence Detail	126	C57BL/6J
transcript	ENSMUST00020183158	Ensembl | MGI Sequence Detail	126	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;