Gm55955 Gene Detail

Summary

• Symbol
  Gm55955
• Name
  predicted gene, 55955

• Feature Type
  miRNA gene
• IDs
  MGI:6848370
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:16067982-16068091 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  118 from dbSNP Build 142
• Strain Annotations
  34

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848370	miRNA gene	Chr3:16067982-16068091 (+)
129S1/SvImJ	ENSMUSG00200027659	miRNA gene	ChrX:140553456-140553565 (+)
129S1/SvImJ	ENSMUSG00200018281	miRNA gene	Chr3:12815395-12815504 (+)
A/J	ENSMUSG00195016197	miRNA gene	Chr3:12858586-12858695 (+)
A/J	ENSMUSG00195011782	miRNA gene	Chr14:81758378-81758487 (+)
A/J	ENSMUSG00195016935	miRNA gene	ChrX:145677213-145677322 (+)
AKR/J	ENSMUSG00220009589	miRNA gene	Chr3:12869198-12869307 (+)
BALB/cJ	ENSMUSG00180001063	miRNA gene	Chr3:12884795-12884904 (+)
C3H/HeJ	ENSMUSG00175010664	miRNA gene	ChrX:145611196-145611305 (+)
C3H/HeJ	ENSMUSG00175003179	miRNA gene	Chr3:12881783-12881892 (+)
C57BL/6NJ	ENSMUSG00215051940	miRNA gene	Chr7:91073242-91073351 (+)
C57BL/6NJ	ENSMUSG00215028813	miRNA gene	ChrX:141435641-141435750 (+)
C57BL/6NJ	ENSMUSG00215001337	miRNA gene	Chr3:13116534-13116643 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020082	miRNA gene	Chr8:13028072-13028181 (-)
CAST/EiJ	ENSTCUG00005025264	miRNA gene	Chr3:12876779-12876892 (+)
CBA/J	ENSMUSG00210001901	miRNA gene	Chr3:12848246-12848355 (+)
CBA/J	ENSMUSG00210030229	miRNA gene	ChrX:143024305-143024414 (+)
CBA/J	ENSMUSG00210017635	miRNA gene	Chr7:44828410-44828517 (+)
DBA/2J	ENSMUSG00185014003	miRNA gene	Chr1:111978519-111978627 (+)
DBA/2J	ENSMUSG00185000717	miRNA gene	Chr3:13017762-13017871 (+)
FVB/NJ	ENSMUSG00205035080	miRNA gene	ChrX:141537823-141537932 (+)
FVB/NJ	ENSMUSG00205002726	miRNA gene	Chr3:12409896-12410005 (+)
JF1/MsJ	ENSUMUG00000019287	miRNA gene	Chr3:12709206-12709315 (+)
LP/J	ENSMUSG00230036765	miRNA gene	Chr13:74941776-74941885 (+)
LP/J	ENSMUSG00230036833	miRNA gene	Chr13:75398196-75398305 (+)
LP/J	ENSMUSG00230004469	miRNA gene	Chr3:15019050-15019159 (+)
LP/J	ENSMUSG00230035957	miRNA gene	Chr13:75406978-75407087 (+)
LP/J	ENSMUSG00230027301	miRNA gene	ChrX:164670334-164670443 (+)
LP/J	ENSMUSG00230035931	miRNA gene	Chr13:74950558-74950667 (+)
LP/J	ENSMUSG00230004203	miRNA gene	Chr14:109864970-109865079 (+)
NOD/ShiLtJ	ENSMUSG00190002552	miRNA gene	Chr3:13199342-13199451 (+)
NZO/HlLtJ	ENSMUSG00225001150	miRNA gene	Chr3:17602072-17602181 (+)
PWK/PhJ	ENSLUMG00010003341	miRNA gene	Chr3:12802281-12802390 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005001640	miRNA gene	Chr3:13111440-13111549 (+)

Homology

• Gene Tree
  Gm55955
  

Sequences &
Gene Models

• All Sequences
  36

• Ensembl
  ENSMUSG00002076321 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076321	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020183775	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;