Gm55947 Gene Detail

Summary

• Symbol
  Gm55947
• Name
  predicted gene, 55947

• Feature Type
  rRNA gene
• IDs
  MGI:6848354
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:111442966-111443083 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  114 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848354	rRNA gene	Chr9:111442966-111443083 (-)
129S1/SvImJ	ENSMUSG00200045474	rRNA gene	Chr9:108532985-108533102 (-)
A/J	ENSMUSG00195045754	rRNA gene	Chr9:107830011-107830128 (-)
AKR/J	ENSMUSG00220029496	rRNA gene	Chr9:108165485-108165602 (-)
BALB/cJ	ENSMUSG00180035285	rRNA gene	Chr9:108284683-108284800 (-)
C3H/HeJ	ENSMUSG00175046716	rRNA gene	Chr9:108500438-108500555 (-)
C57BL/6NJ	ENSMUSG00215041081	rRNA gene	Chr9:108380678-108380795 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035359	rRNA gene	Chr9:108193704-108193821 (-)
CBA/J	ENSMUSG00210047136	rRNA gene	Chr9:108219313-108219430 (-)
DBA/2J	ENSMUSG00185046293	rRNA gene	Chr9:108548365-108548482 (-)
FVB/NJ	ENSMUSG00205050879	rRNA gene	Chr9:108496496-108496613 (-)
JF1/MsJ	ENSUMUG00000055534	rRNA gene	Chr9:108320491-108320608 (-)
LP/J	ENSMUSG00230050427	rRNA gene	Chr9:108665047-108665164 (-)
NOD/ShiLtJ	ENSMUSG00190050146	rRNA gene	Chr9:108136048-108136165 (-)
NZO/HlLtJ	ENSMUSG00225024549	rRNA gene	Chr9:108918555-108918672 (-)
PWK/PhJ	ENSLUMG00010044467	rRNA gene	Chr9:108333232-108333349 (-)
SPRET/EiJ	ENSMSPG00010047739	rRNA gene	Chr9:110116388-110116505 (-)
WSB/EiJ	ENSIUOG00005048589	rRNA gene	Chr9:107603856-107603973 (-)

Homology

• Gene Tree
  Gm55947
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075053 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075053	Ensembl Gene Model | MGI Sequence Detail	118	C57BL/6J
transcript	ENSMUST00020182239	Ensembl | MGI Sequence Detail	118	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;