Gm55930 Gene Detail

Summary

• Symbol
  Gm55930
• Name
  predicted gene, 55930

• Feature Type
  miRNA gene
• IDs
  MGI:6848321
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:91968704-91968813 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  90 from dbSNP Build 142
• Strain Annotations
  45

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848321	miRNA gene	Chr3:91968704-91968813 (-)
129S1/SvImJ	ENSMUSG00200040390	miRNA gene	Chr3:88830983-88831092 (-)
129S1/SvImJ	ENSMUSG00200022720	miRNA gene	Chr11:11825508-11825617 (+)
A/J	ENSMUSG00195005710	miRNA gene	Chr11:11656401-11656510 (+)
A/J	ENSMUSG00195053990	miRNA gene	Chr3:88840669-88840778 (-)
AKR/J	ENSMUSG00220052377	miRNA gene	Chr3:88056584-88056693 (-)
AKR/J	ENSMUSG00220033383	miRNA gene	ChrX:137558103-137558212 (+)
AKR/J	ENSMUSG00220004174	miRNA gene	Chr11:11744826-11744935 (+)
BALB/cJ	ENSMUSG00180042484	miRNA gene	ChrX:141063818-141063927 (+)
BALB/cJ	ENSMUSG00180048608	miRNA gene	Chr3:88975543-88975652 (-)
C3H/HeJ	ENSMUSG00175048635	miRNA gene	Chr3:88773271-88773380 (-)
C3H/HeJ	ENSMUSG00175008452	miRNA gene	Chr11:11712585-11712694 (+)
C3H/HeJ	ENSMUSG00175047097	miRNA gene	Chr13:58563972-58564081 (-)
C57BL/6NJ	ENSMUSG00215041662	miRNA gene	Chr13:58566379-58566488 (-)
C57BL/6NJ	ENSMUSG00215003652	miRNA gene	Chr11:11720185-11720294 (+)
C57BL/6NJ	ENSMUSG00215050864	miRNA gene	Chr3:89212533-89212642 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048088	miRNA gene	Chr3:89108345-89108454 (-)
CBA/J	ENSMUSG00210048287	miRNA gene	Chr3:88893088-88893197 (-)
CBA/J	ENSMUSG00210009749	miRNA gene	Chr11:11701545-11701654 (+)
CBA/J	ENSMUSG00210044939	miRNA gene	Chr13:58763485-58763594 (-)
DBA/2J	ENSMUSG00185012328	miRNA gene	Chr11:11788627-11788736 (+)
DBA/2J	ENSMUSG00185018957	miRNA gene	Chr13:59612105-59612214 (-)
DBA/2J	ENSMUSG00185053662	miRNA gene	Chr3:89028927-89029036 (-)
FVB/NJ	ENSMUSG00205050157	miRNA gene	Chr3:87823884-87823993 (-)
FVB/NJ	ENSMUSG00205005508	miRNA gene	Chr11:11725503-11725612 (+)
JF1/MsJ	ENSUMUG00000053733	miRNA gene	Chr3:88587453-88587562 (-)
JF1/MsJ	ENSUMUG00000055789	miRNA gene	Chr7:40108697-40108806 (+)
JF1/MsJ	ENSUMUG00000040802	miRNA gene	Chr17:46685565-46685674 (+)
LP/J	ENSMUSG00230004729	miRNA gene	Chr11:12815634-12815743 (+)
LP/J	ENSMUSG00230036538	miRNA gene	Chr13:68984009-68984118 (-)
LP/J	ENSMUSG00230036115	miRNA gene	Chr3:91054249-91054358 (-)
NOD/ShiLtJ	ENSMUSG00190038402	miRNA gene	ChrX:142058603-142058712 (+)
NOD/ShiLtJ	ENSMUSG00190050128	miRNA gene	Chr3:89227432-89227541 (-)
NOD/ShiLtJ	ENSMUSG00190009109	miRNA gene	Chr11:11764786-11764895 (+)
NZO/HlLtJ	ENSMUSG00225012590	miRNA gene	Chr3:93812953-93813062 (-)
NZO/HlLtJ	ENSMUSG00225039201	miRNA gene	ChrX:168058697-168058806 (+)
NZO/HlLtJ	ENSMUSG00225033416	miRNA gene	Chr11:14831826-14831935 (+)
PWK/PhJ	ENSLUMG00010052983	miRNA gene	Chr3:88705851-88705960 (-)
SPRET/EiJ	ENSMSPG00010047064	miRNA gene	Chr1:125041407-125041515 (-)
SPRET/EiJ	ENSMSPG00010001402	miRNA gene	Chr18:84350272-84350380 (+)
SPRET/EiJ	ENSMSPG00010050697	miRNA gene	Chr3:89142902-89143010 (-)
SPRET/EiJ	ENSMSPG00010003800	miRNA gene	Chr14:30966571-30966679 (+)
SPRET/EiJ	ENSMSPG00010033210	miRNA gene	Chr5:18124346-18124454 (-)
WSB/EiJ	ENSIUOG00005010571	miRNA gene	Chr11:11685781-11685890 (+)
WSB/EiJ	ENSIUOG00005050922	miRNA gene	Chr3:89343115-89343224 (-)

Homology

• Gene Tree
  Gm55930
  

Sequences &
Gene Models

• All Sequences
  47

• Ensembl
  ENSMUSG00002075468 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075468	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020182899	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;