Gm55908 Gene Detail

Summary

• Symbol
  Gm55908
• Name
  predicted gene, 55908

• Feature Type
  snRNA gene
• IDs
  MGI:6848277
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:22684047-22684131 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  158 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848277	snRNA gene	Chr9:22684047-22684131 (-)
129S1/SvImJ	ENSMUSG00200050199	snRNA gene	Chr9:19645465-19645549 (-)
A/J	ENSMUSG00195040072	snRNA gene	Chr9:19476410-19476494 (-)
AKR/J	ENSMUSG00220037127	snRNA gene	Chr9:19478839-19478923 (-)
BALB/cJ	ENSMUSG00180043672	snRNA gene	Chr9:19610702-19610786 (-)
C3H/HeJ	ENSMUSG00175046252	snRNA gene	Chr9:19587242-19587326 (-)
C57BL/6NJ	ENSMUSG00215039383	snRNA gene	Chr9:19573672-19573756 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005036081	snRNA gene	Chr9:19605693-19605777 (-)
CBA/J	ENSMUSG00210045333	snRNA gene	Chr9:19566783-19566867 (-)
DBA/2J	ENSMUSG00185027601	snRNA gene	Chr9:19669417-19669501 (-)
FVB/NJ	ENSMUSG00205044700	snRNA gene	Chr9:19919118-19919202 (-)
JF1/MsJ	ENSUMUG00000050312	snRNA gene	Chr9:19788009-19788093 (-)
LP/J	ENSMUSG00230044819	snRNA gene	Chr9:20076529-20076613 (-)
NOD/ShiLtJ	ENSMUSG00190043265	snRNA gene	Chr9:19604944-19605028 (-)
NZO/HlLtJ	ENSMUSG00225051469	snRNA gene	Chr9:20016861-20016945 (-)
PWK/PhJ	ENSLUMG00010047967	snRNA gene	Chr9:19687996-19688080 (-)
SPRET/EiJ	ENSMSPG00010025102	snRNA gene	Chr9:19907978-19908062 (-)
WSB/EiJ	ENSIUOG00005046116	snRNA gene	Chr9:19139442-19139526 (-)

Homology

• Gene Tree
  Gm55908
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076498 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076498	Ensembl Gene Model | MGI Sequence Detail	85	C57BL/6J
transcript	ENSMUST00020183404	Ensembl | MGI Sequence Detail	85	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm55908:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr88500	Chr9:22684117-22684144 (-)	0 bp