Gm55900 Gene Detail

Summary

• Symbol
  Gm55900
• Name
  predicted gene, 55900

• Feature Type
  miRNA gene
• IDs
  MGI:6848262
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:117912430-117912554 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  84 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848262	miRNA gene	Chr6:117912430-117912554 (-)
129S1/SvImJ	ENSMUSG00200051641	miRNA gene	Chr6:115120209-115120333 (-)
A/J	ENSMUSG00195048238	miRNA gene	Chr6:114520396-114520520 (-)
AKR/J	ENSMUSG00220034427	miRNA gene	Chr6:113406266-113406390 (-)
BALB/cJ	ENSMUSG00180050954	miRNA gene	Chr6:114888110-114888234 (-)
C3H/HeJ	ENSMUSG00175036179	miRNA gene	Chr6:62581843-62581967 (+)
C57BL/6NJ	ENSMUSG00215049371	miRNA gene	Chr6:114878272-114878396 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005050704	miRNA gene	Chr6:114678942-114679066 (-)
CBA/J	ENSMUSG00210045218	miRNA gene	Chr6:114655400-114655524 (-)
DBA/2J	ENSMUSG00185049696	miRNA gene	Chr6:115313692-115313816 (-)
FVB/NJ	ENSMUSG00205051049	miRNA gene	Chr6:113769585-113769709 (-)
JF1/MsJ	ENSUMUG00000055343	miRNA gene	Chr6:113911239-113911363 (-)
LP/J	ENSMUSG00230049430	miRNA gene	Chr6:116517753-116517877 (-)
NOD/ShiLtJ	ENSMUSG00190052327	miRNA gene	Chr6:114267682-114267806 (-)
NZO/HlLtJ	ENSMUSG00225047916	miRNA gene	Chr6:118373579-118373703 (-)
PWK/PhJ	ENSLUMG00010048986	miRNA gene	Chr6:113270213-113270337 (-)
SPRET/EiJ	ENSMSPG00010046788	miRNA gene	Chr6:116119673-116119797 (-)
WSB/EiJ	ENSIUOG00005045395	miRNA gene	Chr6:114945483-114945607 (-)

Homology

• Gene Tree
  Gm55900
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075781 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075781	Ensembl Gene Model | MGI Sequence Detail	125	C57BL/6J
transcript	ENSMUST00020183679	Ensembl | MGI Sequence Detail	125	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;