Gm55897 Gene Detail

Summary

• Symbol
  Gm55897
• Name
  predicted gene, 55897

• Feature Type
  miRNA gene
• IDs
  MGI:6848256
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:108474626-108474699 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  109 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848256	miRNA gene	Chr3:108474626-108474699 (-)
129S1/SvImJ	ENSMUSG00200035812	miRNA gene	Chr3:105090836-105090909 (-)
A/J	ENSMUSG00195025577	miRNA gene	Chr3:105517312-105517385 (-)
AKR/J	ENSMUSG00220033199	miRNA gene	Chr3:103880934-103881007 (-)
BALB/cJ	ENSMUSG00180020876	miRNA gene	Chr3:105463812-105463885 (-)
C3H/HeJ	ENSMUSG00175030366	miRNA gene	Chr3:104997378-104997451 (-)
C57BL/6NJ	ENSMUSG00215034027	miRNA gene	Chr3:105725292-105725365 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005027259	miRNA gene	Chr3:105999503-105999576 (-)
CBA/J	ENSMUSG00210008920	miRNA gene	Chr3:105619266-105619339 (-)
DBA/2J	ENSMUSG00185022202	miRNA gene	Chr3:106088582-106088655 (-)
FVB/NJ	ENSMUSG00205031620	miRNA gene	Chr3:104655301-104655374 (-)
JF1/MsJ	ENSUMUG00000005349	miRNA gene	Chr3:105066766-105066839 (-)
LP/J	ENSMUSG00230021205	miRNA gene	Chr3:108003819-108003892 (-)
NOD/ShiLtJ	ENSMUSG00190037674	miRNA gene	Chr3:106326700-106326773 (-)
NZO/HlLtJ	ENSMUSG00225020675	miRNA gene	Chr3:110512421-110512494 (-)
PWK/PhJ	ENSLUMG00010024893	miRNA gene	Chr3:104923101-104923172 (-)
SPRET/EiJ	ENSMSPG00010035872	miRNA gene	Chr3:105426938-105427011 (-)
WSB/EiJ	ENSIUOG00005005080	miRNA gene	Chr3:105641770-105641843 (-)

Homology

• Gene Tree
  Gm55897
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075820 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075820	Ensembl Gene Model | MGI Sequence Detail	74	C57BL/6J
transcript	ENSMUST00020182633	Ensembl | MGI Sequence Detail	74	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;