Gm55893 Gene Detail

Summary

• Symbol
  Gm55893
• Name
  predicted gene, 55893

• Feature Type
  miRNA gene
• IDs
  MGI:6848250
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:31783936-31784017 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  84 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848250	miRNA gene	Chr17:31783936-31784017 (-)
129S1/SvImJ	ENSMUSG00200054240	miRNA gene	Chr17:27470322-27470403 (-)
A/J	ENSMUSG00195054499	miRNA gene	Chr17:28403489-28403570 (-)
AKR/J	ENSMUSG00220053764	miRNA gene	Chr17:27431510-27431591 (-)
BALB/cJ	ENSMUSG00180051212	miRNA gene	Chr17:27745882-27745963 (-)
C3H/HeJ	ENSMUSG00175054069	miRNA gene	Chr17:27312670-27312751 (-)
C57BL/6NJ	ENSMUSG00215054679	miRNA gene	Chr17:27301898-27301979 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005050307	miRNA gene	Chr17:28306571-28306652 (-)
CBA/J	ENSMUSG00210051232	miRNA gene	Chr17:27139599-27139680 (-)
DBA/2J	ENSMUSG00185054635	miRNA gene	Chr17:29756343-29756424 (-)
FVB/NJ	ENSMUSG00205053385	miRNA gene	Chr17:27611719-27611800 (-)
JF1/MsJ	ENSUMUG00000057930	miRNA gene	Chr17:29047561-29047642 (-)
LP/J	ENSMUSG00230054867	miRNA gene	Chr17:30868845-30868926 (-)
NOD/ShiLtJ	ENSMUSG00190054241	miRNA gene	Chr17:27261980-27262061 (-)
NZO/HlLtJ	ENSMUSG00225055086	miRNA gene	Chr17:32905830-32905911 (-)
PWK/PhJ	ENSLUMG00010053434	miRNA gene	Chr17:26871633-26871714 (-)
SPRET/EiJ	ENSMSPG00010050163	miRNA gene	Chr17:27999954-28000035 (-)
WSB/EiJ	ENSIUOG00005051519	miRNA gene	Chr17:28019020-28019101 (-)

Homology

• Gene Tree
  Gm55893
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075796 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075796	Ensembl Gene Model | MGI Sequence Detail	82	C57BL/6J
transcript	ENSMUST00020183737	Ensembl | MGI Sequence Detail	82	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;