Gm55890 Gene Detail

Summary

• Symbol
  Gm55890
• Name
  predicted gene, 55890

• Feature Type
  miRNA gene
• IDs
  MGI:6848244
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:36444670-36444732 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  154 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848244	miRNA gene	Chr8:36444670-36444732 (-)
129S1/SvImJ	ENSMUSG00200007650	miRNA gene	Chr8:31536698-31536758 (-)
A/J	ENSMUSG00195005904	miRNA gene	Chr8:32038888-32038948 (-)
AKR/J	ENSMUSG00220006296	miRNA gene	Chr8:31801562-31801622 (-)
BALB/cJ	ENSMUSG00180003175	miRNA gene	Chr8:31582243-31582303 (-)
C3H/HeJ	ENSMUSG00175014716	miRNA gene	Chr8:31744724-31744784 (-)
C57BL/6NJ	ENSMUSG00215008381	miRNA gene	Chr8:31513991-31514053 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005005670	miRNA gene	Chr8:31703346-31703408 (-)
CBA/J	ENSMUSG00210012775	miRNA gene	Chr8:31567726-31567786 (-)
DBA/2J	ENSMUSG00185002389	miRNA gene	Chr8:37493969-37494029 (-)
FVB/NJ	ENSMUSG00205002366	miRNA gene	Chr8:30780325-30780385 (-)
JF1/MsJ	ENSUMUG00000009316	miRNA gene	Chr8:39190236-39190298 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190015618	miRNA gene	Chr8:31615595-31615655 (-)
NZO/HlLtJ	ENSMUSG00225015050	miRNA gene	Chr8:44745423-44745485 (-)
PWK/PhJ	ENSLUMG00010012790	miRNA gene	Chr8:31413872-31413934 (-)
SPRET/EiJ	ENSMSPG00010004495	miRNA gene	Chr8:32149437-32149499 (-)
WSB/EiJ	ENSIUOG00005005940	miRNA gene	Chr8:32388018-32388076 (-)

Homology

• Gene Tree
  Gm55890
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075152 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075152	Ensembl Gene Model | MGI Sequence Detail	63	C57BL/6J
transcript	ENSMUST00020183155	Ensembl | MGI Sequence Detail	63	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;