Gm55889 Pseudogene Detail

Summary

• Symbol
  Gm55889
• Name
  predicted gene, 55889

• Feature Type
  pseudogene
• IDs
  MGI:6848243
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:110716986-110718801 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  76 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848243	pseudogene	Chr7:110716986-110718801 (-)
129S1/SvImJ	ENSMUSG00200035060	pseudogene	Chr7:97260177-97261992 (-)
A/J	ENSMUSG00195041277	pseudogene	Chr7:101763607-101765422 (-)
AKR/J	ENSMUSG00220039692	pseudogene	Chr7:95166562-95168377 (-)
BALB/cJ	ENSMUSG00180046557	pseudogene	Chr7:98431736-98433551 (-)
C3H/HeJ	ENSMUSG00175052021	pseudogene	Chr7:99067599-99069414 (-)
C57BL/6NJ	ENSMUSG00215051750	pseudogene	Chr7:98372414-98374229 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005044779	pseudogene	Chr7:101746021-101747845 (-)
CBA/J	ENSMUSG00210047407	pseudogene	Chr7:98894642-98896457 (-)
DBA/2J	ENSMUSG00185022072	pseudogene	Chr7:103244780-103246595 (-)
FVB/NJ	ENSMUSG00205048623	pseudogene	Chr7:98857053-98858868 (-)
JF1/MsJ	ENSUMUG00000052443	pseudogene	Chr7:108258261-108260086 (-)
LP/J	ENSMUSG00230048984	pseudogene	Chr7:109345871-109347686 (-)
NOD/ShiLtJ	ENSMUSG00190047417	pseudogene	Chr7:99056187-99058002 (-)
NZO/HlLtJ	ENSMUSG00225018648	pseudogene	Chr7:107568636-107570461 (-)
PWK/PhJ	ENSLUMG00010043826	pseudogene	Chr7:97391343-97393167 (-)
SPRET/EiJ	ENSMSPG00010041929	pseudogene	Chr7:98558715-98560540 (-)
WSB/EiJ	ENSIUOG00005050357	pseudogene	Chr7:99703058-99704873 (-)

Homology

• Gene Tree
  Gm55889
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118555 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118555	Ensembl Gene Model | MGI Sequence Detail	1816	C57BL/6J
transcript	ENSMUST00000238860	Ensembl | MGI Sequence Detail	1816	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;