Gm55886 Gene Detail

Summary

• Symbol
  Gm55886
• Name
  predicted gene, 55886

• Feature Type
  rRNA gene
• IDs
  MGI:6848237
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:36214603-36214716 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848237	rRNA gene	Chr8:36214603-36214716 (+)
129S1/SvImJ	ENSMUSG00200007993	rRNA gene	Chr8:31308220-31308333 (+)
A/J	ENSMUSG00195005993	rRNA gene	Chr8:31810351-31810464 (+)
AKR/J	ENSMUSG00220006067	rRNA gene	Chr8:31573024-31573137 (+)
BALB/cJ	ENSMUSG00180003381	rRNA gene	Chr8:31353689-31353802 (+)
C3H/HeJ	ENSMUSG00175014856	rRNA gene	Chr8:31516229-31516342 (+)
C57BL/6NJ	ENSMUSG00215008580	rRNA gene	Chr8:31283784-31283897 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005005578	rRNA gene	Chr8:31471157-31471270 (+)
CBA/J	ENSMUSG00210012787	rRNA gene	Chr8:31339196-31339309 (+)
DBA/2J	ENSMUSG00185002355	rRNA gene	Chr8:37265477-37265590 (+)
FVB/NJ	ENSMUSG00205002385	rRNA gene	Chr8:30551805-30551918 (+)
JF1/MsJ	ENSUMUG00000010311	rRNA gene	Chr8:38959779-38959892 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190015672	rRNA gene	Chr8:31387103-31387216 (+)
NZO/HlLtJ	ENSMUSG00225015141	rRNA gene	Chr8:44511752-44511865 (+)
PWK/PhJ	ENSLUMG00010013170	rRNA gene	Chr8:31183580-31183693 (+)
SPRET/EiJ	ENSMSPG00010004470	rRNA gene	Chr8:31914746-31914859 (+)
WSB/EiJ	ENSIUOG00005006017	rRNA gene	Chr8:32148681-32148794 (+)

Homology

• Gene Tree
  Gm55886
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075505 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075505	Ensembl Gene Model | MGI Sequence Detail	114	C57BL/6J
transcript	ENSMUST00020182418	Ensembl | MGI Sequence Detail	114	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;