Gm55885 Gene Detail

Summary

• Symbol
  Gm55885
• Name
  predicted gene, 55885

• Feature Type
  miRNA gene
• IDs
  MGI:6848235
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:120165313-120165450 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  70 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848235	miRNA gene	Chr11:120165313-120165450 (+)
129S1/SvImJ	ENSMUSG00200052779	miRNA gene	Chr11:117528249-117528386 (+)
A/J	ENSMUSG00195032154	miRNA gene	Chr11:117203272-117203409 (+)
AKR/J	ENSMUSG00220031508	miRNA gene	Chr11:117353674-117353811 (+)
BALB/cJ	ENSMUSG00180052318	miRNA gene	Chr11:117496063-117496200 (+)
C3H/HeJ	ENSMUSG00175047977	miRNA gene	Chr11:117453855-117453992 (+)
C57BL/6NJ	ENSMUSG00215047122	miRNA gene	Chr11:117023802-117023939 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005037057	miRNA gene	Chr11:116882689-116882826 (+)
CBA/J	ENSMUSG00210050630	miRNA gene	Chr11:117167883-117168020 (+)
DBA/2J	ENSMUSG00185026994	miRNA gene	Chr11:117481042-117481179 (+)
FVB/NJ	ENSMUSG00205046560	miRNA gene	Chr11:117328797-117328934 (+)
JF1/MsJ	ENSUMUG00000053490	miRNA gene	Chr11:117779662-117779799 (+)
LP/J	ENSMUSG00230051177	miRNA gene	Chr11:118546830-118546967 (+)
NOD/ShiLtJ	ENSMUSG00190050398	miRNA gene	Chr11:117552222-117552359 (+)
NZO/HlLtJ	ENSMUSG00225054098	miRNA gene	Chr11:120695934-120696071 (+)
PWK/PhJ	ENSLUMG00010024331	miRNA gene	Chr11:117297108-117297245 (+)
SPRET/EiJ	ENSMSPG00010043209	miRNA gene	Chr11:117872207-117872344 (+)
WSB/EiJ	ENSIUOG00005049322	miRNA gene	Chr11:117294489-117294626 (+)

Homology

• Gene Tree
  Gm55885
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076666 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076666	Ensembl Gene Model | MGI Sequence Detail	138	C57BL/6J
transcript	ENSMUST00020183293	Ensembl | MGI Sequence Detail	138	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;