Gm55879 Gene Detail

Summary

• Symbol
  Gm55879
• Name
  predicted gene, 55879

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6848223
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:59665739-59665823 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  112 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848223	unclassified non-coding RNA gene	Chr1:59665739-59665823 (+)
129S1/SvImJ	ENSMUSG00200018998	unclassified non-coding RNA gene	Chr1:57164785-57164869 (+)
A/J	ENSMUSG00195031709	unclassified non-coding RNA gene	Chr1:56704017-56704101 (+)
AKR/J	ENSMUSG00220040185	unclassified non-coding RNA gene	Chr1:56788499-56788583 (+)
BALB/cJ	ENSMUSG00180014628	unclassified non-coding RNA gene	Chr1:56938535-56938619 (+)
C3H/HeJ	ENSMUSG00175001069	unclassified non-coding RNA gene	Chr1:57081427-57081511 (+)
C57BL/6NJ	ENSMUSG00215037176	unclassified non-coding RNA gene	Chr1:57013288-57013372 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005013939	unclassified non-coding RNA gene	Chr1:56855493-56855577 (+)
CBA/J	ENSMUSG00210054153	unclassified non-coding RNA gene	Chr1:56766444-56766528 (+)
DBA/2J	ENSMUSG00185055097	unclassified non-coding RNA gene	Chr1:57886133-57886217 (+)
FVB/NJ	ENSMUSG00205022757	unclassified non-coding RNA gene	Chr1:56727239-56727323 (+)
JF1/MsJ	ENSUMUG00000046498	unclassified non-coding RNA gene	Chr1:56850452-56850536 (+)
LP/J	ENSMUSG00230030300	unclassified non-coding RNA gene	Chr1:57886685-57886769 (+)
NOD/ShiLtJ	ENSMUSG00190042741	unclassified non-coding RNA gene	Chr1:56919588-56919672 (+)
NZO/HlLtJ	ENSMUSG00225009217	unclassified non-coding RNA gene	Chr1:61094888-61094972 (+)
PWK/PhJ	ENSLUMG00010025791	unclassified non-coding RNA gene	Chr1:56360125-56360209 (+)
SPRET/EiJ	ENSMSPG00010028256	unclassified non-coding RNA gene	Chr1:58299891-58299975 (+)
WSB/EiJ	ENSIUOG00005021698	unclassified non-coding RNA gene	Chr1:56552951-56553035 (+)

Homology

• Gene Tree
  Gm55879
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075401 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075401	Ensembl Gene Model | MGI Sequence Detail	85	C57BL/6J
transcript	ENSMUST00020183682	Ensembl | MGI Sequence Detail	85	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;