Gm55876 Gene Detail

Summary

• Symbol
  Gm55876
• Name
  predicted gene, 55876

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6848217
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:23692392-23692721 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  74 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848217	unclassified non-coding RNA gene	Chr5:23692392-23692721 (-)
129S1/SvImJ	ENSMUSG00200011892	unclassified non-coding RNA gene	Chr5:19314631-19314960 (-)
A/J	ENSMUSG00195041336	unclassified non-coding RNA gene	Chr5:18769706-18770035 (-)
AKR/J	ENSMUSG00220037706	unclassified non-coding RNA gene	Chr5:18864009-18864338 (-)
BALB/cJ	ENSMUSG00180025316	unclassified non-coding RNA gene	Chr5:18647583-18647912 (-)
C3H/HeJ	ENSMUSG00175027659	unclassified non-coding RNA gene	Chr5:20567946-20568275 (-)
C57BL/6NJ	ENSMUSG00215029988	unclassified non-coding RNA gene	Chr5:19203538-19203867 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005003513	unclassified non-coding RNA gene	Chr5:18789078-18789407 (-)
CBA/J	ENSMUSG00210005485	unclassified non-coding RNA gene	Chr5:19607502-19607831 (-)
DBA/2J	ENSMUSG00185038445	unclassified non-coding RNA gene	Chr5:21158030-21158359 (-)
FVB/NJ	ENSMUSG00205036965	unclassified non-coding RNA gene	Chr5:18381013-18381342 (-)
JF1/MsJ	ENSUMUG00000006825	unclassified non-coding RNA gene	Chr5:25702827-25703156 (-)
LP/J	ENSMUSG00230025681	unclassified non-coding RNA gene	Chr5:25596825-25597154 (-)
NOD/ShiLtJ	ENSMUSG00190005302	unclassified non-coding RNA gene	Chr5:18685575-18685904 (-)
NZO/HlLtJ	ENSMUSG00225020433	unclassified non-coding RNA gene	Chr5:30994429-30994758 (-)
PWK/PhJ	ENSLUMG00010036154	unclassified non-coding RNA gene	Chr5:18756584-18756913 (-)
SPRET/EiJ	ENSMSPG00010031634	unclassified non-coding RNA gene	Chr5:19622741-19623070 (-)
WSB/EiJ	ENSIUOG00005044060	unclassified non-coding RNA gene	Chr5:21500249-21500578 (-)

Homology

• Gene Tree
  Gm55876
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm55876
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076957 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076957	Ensembl Gene Model | MGI Sequence Detail	330	C57BL/6J
transcript	ENSMUST00020182883	Ensembl | MGI Sequence Detail	330	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:269071 Wong JC, et al., Functional evidence implicating chromosome 7q22 haploinsufficiency in myelodysplastic syndrome pathogenesis. Elife. 2015 Jul 20;4