Gm55871 Gene Detail

Summary

• Symbol
  Gm55871
• Name
  predicted gene, 55871

• Feature Type
  miRNA gene
• IDs
  MGI:6848207
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:31186171-31186268 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  185 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848207	miRNA gene	Chr17:31186171-31186268 (+)
129S1/SvImJ	ENSMUSG00200054114	miRNA gene	Chr17:26872541-26872638 (+)
A/J	ENSMUSG00195054666	miRNA gene	Chr17:27804466-27804577 (+)
AKR/J	ENSMUSG00220053974	miRNA gene	Chr17:26832527-26832642 (+)
BALB/cJ	ENSMUSG00180050133	miRNA gene	Chr17:27148010-27148107 (+)
C3H/HeJ	ENSMUSG00175053892	miRNA gene	Chr17:26713767-26713866 (+)
C57BL/6NJ	ENSMUSG00215054665	miRNA gene	Chr17:26703566-26703663 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005050211	miRNA gene	Chr17:27578331-27578427 (+)
CBA/J	ENSMUSG00210051449	miRNA gene	Chr17:26540795-26540908 (+)
DBA/2J	ENSMUSG00185054503	miRNA gene	Chr17:29158551-29158648 (+)
FVB/NJ	ENSMUSG00205053710	miRNA gene	Chr17:27014548-27014661 (+)
JF1/MsJ	ENSUMUG00000057993	miRNA gene	Chr17:28334821-28334926 (+)
LP/J	ENSMUSG00230055253	miRNA gene	Chr17:30271101-30271198 (+)
NOD/ShiLtJ	ENSMUSG00190054339	miRNA gene	Chr17:26655409-26655495 (+)
NZO/HlLtJ	ENSMUSG00225055101	miRNA gene	Chr17:32248418-32248515 (+)
PWK/PhJ	ENSLUMG00010053488	miRNA gene	Chr17:26139643-26139729 (+)
SPRET/EiJ	ENSMSPG00010050787	miRNA gene	Chr17:27404402-27404490 (+)
WSB/EiJ	ENSIUOG00005052426	miRNA gene	Chr17:27421821-27421934 (+)

Homology

• Gene Tree
  Gm55871
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076283 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076283	Ensembl Gene Model | MGI Sequence Detail	98	C57BL/6J
transcript	ENSMUST00020182781	Ensembl | MGI Sequence Detail	98	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;