Gm55869 Gene Detail

Summary

• Symbol
  Gm55869
• Name
  predicted gene, 55869

• Feature Type
  miRNA gene
• IDs
  MGI:6848203
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:23484864-23484909 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  147 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848203	miRNA gene	Chr5:23484864-23484909 (-)
129S1/SvImJ	ENSMUSG00200011171	miRNA gene	Chr5:19102004-19102049 (-)
A/J	ENSMUSG00195040859	miRNA gene	Chr5:18618124-18618169 (-)
AKR/J	ENSMUSG00220039537	miRNA gene	Chr5:18645862-18645907 (-)
BALB/cJ	ENSMUSG00180024738	miRNA gene	Chr5:18483803-18483848 (-)
C3H/HeJ	ENSMUSG00175027254	miRNA gene	Chr5:20416358-20416403 (-)
C57BL/6NJ	ENSMUSG00215027928	miRNA gene	Chr5:19034246-19034291 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005003546	miRNA gene	Chr5:18636618-18636663 (-)
CBA/J	ENSMUSG00210005332	miRNA gene	Chr5:19455940-19455985 (-)
DBA/2J	ENSMUSG00185040054	miRNA gene	Chr5:20939884-20939929 (-)
FVB/NJ	ENSMUSG00205032961	miRNA gene	Chr5:18189417-18189462 (-)
JF1/MsJ	ENSUMUG00000006510	miRNA gene	Chr5:25493185-25493230 (-)
LP/J	ENSMUSG00230027099	miRNA gene	Chr5:25384199-25384244 (-)
NOD/ShiLtJ	ENSMUSG00190004970	miRNA gene	Chr5:18467462-18467507 (-)
NZO/HlLtJ	ENSMUSG00225022020	miRNA gene	Chr5:30776508-30776553 (-)
PWK/PhJ	ENSLUMG00010037675	miRNA gene	Chr5:18549836-18549881 (-)
SPRET/EiJ	ENSMSPG00010030450	miRNA gene	Chr5:19467788-19467833 (-)
WSB/EiJ	ENSIUOG00005043272	miRNA gene	Chr5:21269900-21269945 (-)

Homology

• Gene Tree
  Gm55869
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm55869
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076077 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076077	Ensembl Gene Model | MGI Sequence Detail	46	C57BL/6J
transcript	ENSMUST00020183784	Ensembl | MGI Sequence Detail	46	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:269071 Wong JC, et al., Functional evidence implicating chromosome 7q22 haploinsufficiency in myelodysplastic syndrome pathogenesis. Elife. 2015 Jul 20;4