Gm55868 Gene Detail

Summary

• Symbol
  Gm55868
• Name
  predicted gene, 55868

• Feature Type
  miRNA gene
• IDs
  MGI:6848201
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:22944017-22944109 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  109 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848201	miRNA gene	Chr5:22944017-22944109 (+)
129S1/SvImJ	ENSMUSG00200011782	miRNA gene	Chr5:18548643-18548739 (+)
A/J	ENSMUSG00195042267	miRNA gene	Chr5:18077086-18077153 (+)
AKR/J	ENSMUSG00220039047	miRNA gene	Chr5:18101846-18101915 (+)
BALB/cJ	ENSMUSG00180027773	miRNA gene	Chr5:17912129-17912221 (+)
C3H/HeJ	ENSMUSG00175027789	miRNA gene	Chr5:19875310-19875379 (+)
C57BL/6NJ	ENSMUSG00215028785	miRNA gene	Chr5:18492400-18492492 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005003580	miRNA gene	Chr5:18082015-18082136 (+)
CBA/J	ENSMUSG00210005576	miRNA gene	Chr5:18914947-18915016 (+)
DBA/2J	ENSMUSG00185039761	miRNA gene	Chr5:20378626-20378724 (+)
FVB/NJ	ENSMUSG00205036115	miRNA gene	Chr5:17608791-17608885 (+)
JF1/MsJ	ENSUMUG00000007284	miRNA gene	Chr5:24937420-24937533 (+)
LP/J	ENSMUSG00230027050	miRNA gene	Chr5:24830850-24830946 (+)
NOD/ShiLtJ	ENSMUSG00190005244	miRNA gene	Chr5:17906792-17906890 (+)
NZO/HlLtJ	ENSMUSG00225009950	miRNA gene	Chr5:30212902-30212987 (+)
PWK/PhJ	ENSLUMG00010036546	miRNA gene	Chr5:17987423-17987558 (+)
SPRET/EiJ	ENSMSPG00010031294	miRNA gene	Chr5:18906400-18906470 (+)
WSB/EiJ	ENSIUOG00005033491	miRNA gene	Chr5:20699019-20699113 (+)

Homology

• Gene Tree
  Gm55868
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm55868
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076602 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076602	Ensembl Gene Model | MGI Sequence Detail	93	C57BL/6J
transcript	ENSMUST00020182186	Ensembl | MGI Sequence Detail	93	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:269071 Wong JC, et al., Functional evidence implicating chromosome 7q22 haploinsufficiency in myelodysplastic syndrome pathogenesis. Elife. 2015 Jul 20;4