Gm55857 Gene Detail

Summary

• Symbol
  Gm55857
• Name
  predicted gene, 55857

• Feature Type
  miRNA gene
• IDs
  MGI:6848179
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:64132805-64132931 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  106 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848179	miRNA gene	Chr9:64132805-64132931 (+)
129S1/SvImJ	ENSMUSG00200044608	miRNA gene	Chr9:61235365-61235491 (+)
A/J	ENSMUSG00195026902	miRNA gene	Chr9:60944990-60945116 (+)
AKR/J	ENSMUSG00220042224	miRNA gene	Chr9:61095401-61095527 (+)
BALB/cJ	ENSMUSG00180017931	miRNA gene	Chr9:61083052-61083178 (+)
C3H/HeJ	ENSMUSG00175013361	miRNA gene	Chr9:61078755-61078881 (+)
C57BL/6NJ	ENSMUSG00215031738	miRNA gene	Chr9:61070164-61070290 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033302	miRNA gene	Chr9:60990998-60991124 (+)
CBA/J	ENSMUSG00210014875	miRNA gene	Chr9:61165245-61165371 (+)
DBA/2J	ENSMUSG00185034363	miRNA gene	Chr9:61188458-61188584 (+)
FVB/NJ	ENSMUSG00205037392	miRNA gene	Chr9:61515604-61515730 (+)
JF1/MsJ	ENSUMUG00000037946	miRNA gene	Chr9:61253114-61253240 (+)
LP/J	ENSMUSG00230027473	miRNA gene	Chr9:61434509-61434635 (+)
NOD/ShiLtJ	ENSMUSG00190022735	miRNA gene	Chr9:61275372-61275498 (+)
NZO/HlLtJ	ENSMUSG00225046486	miRNA gene	Chr9:61499789-61499915 (+)
PWK/PhJ	ENSLUMG00010027828	miRNA gene	Chr9:61217971-61218097 (+)
SPRET/EiJ	ENSMSPG00010021335	miRNA gene	Chr9:62277267-62277385 (+)
WSB/EiJ	ENSIUOG00005027001	miRNA gene	Chr9:60681070-60681196 (+)

Homology

• Gene Tree
  Gm55857
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075562 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075562	Ensembl Gene Model | MGI Sequence Detail	127	C57BL/6J
transcript	ENSMUST00020183219	Ensembl | MGI Sequence Detail	127	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;