Gm55854 Gene Detail

Summary

• Symbol
  Gm55854
• Name
  predicted gene, 55854

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6848173
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:30734417-30734646 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  82 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848173	unclassified non-coding RNA gene	Chr6:30734417-30734646 (+)
129S1/SvImJ	ENSMUSG00200035252	unclassified non-coding RNA gene	Chr6:27786006-27786235 (+)
A/J	ENSMUSG00195009468	unclassified non-coding RNA gene	Chr6:27748640-27748869 (+)
AKR/J	ENSMUSG00220003787	unclassified non-coding RNA gene	Chr6:27341723-27341952 (+)
BALB/cJ	ENSMUSG00180024559	unclassified non-coding RNA gene	Chr6:27880283-27880512 (+)
C3H/HeJ	ENSMUSG00175019225	unclassified non-coding RNA gene	Chr6:27743446-27743675 (+)
C57BL/6NJ	ENSMUSG00215028727	unclassified non-coding RNA gene	Chr6:27786844-27787073 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005028018	unclassified non-coding RNA gene	Chr6:27339192-27339421 (+)
CBA/J	ENSMUSG00210004928	unclassified non-coding RNA gene	Chr6:27764605-27764834 (+)
DBA/2J	ENSMUSG00185022196	unclassified non-coding RNA gene	Chr6:27859163-27859392 (+)
FVB/NJ	ENSMUSG00205032904	unclassified non-coding RNA gene	Chr6:27833720-27833949 (+)
JF1/MsJ	ENSUMUG00000035134	unclassified non-coding RNA gene	Chr6:27570764-27570993 (+)
LP/J	ENSMUSG00230030752	unclassified non-coding RNA gene	Chr6:28802542-28802771 (+)
NOD/ShiLtJ	ENSMUSG00190031749	unclassified non-coding RNA gene	Chr6:27628238-27628467 (+)
NZO/HlLtJ	ENSMUSG00225014710	unclassified non-coding RNA gene	Chr6:30763553-30763782 (+)
PWK/PhJ	ENSLUMG00010025795	unclassified non-coding RNA gene	Chr6:27339478-27339707 (+)
SPRET/EiJ	ENSMSPG00010023377	unclassified non-coding RNA gene	Chr6:27765310-27765539 (+)
WSB/EiJ	ENSIUOG00005033652	unclassified non-coding RNA gene	Chr6:27938252-27938481 (+)

Homology

• Gene Tree
  Gm55854
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074898 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074898	Ensembl Gene Model | MGI Sequence Detail	230	C57BL/6J
transcript	ENSMUST00020182982	Ensembl | MGI Sequence Detail	230	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;