Gm55850 Gene Detail

Summary

• Symbol
  Gm55850
• Name
  predicted gene, 55850

• Feature Type
  snRNA gene
• IDs
  MGI:6848165
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:132028377-132028492 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  151 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848165	snRNA gene	Chr1:132028377-132028492 (+)
129S1/SvImJ	ENSMUSG00200009320	snRNA gene	Chr1:129590199-129590314 (+)
A/J	ENSMUSG00195045650	snRNA gene	Chr1:128690912-128691027 (+)
AKR/J	ENSMUSG00220051016	snRNA gene	Chr1:128521361-128521476 (+)
BALB/cJ	ENSMUSG00180039738	snRNA gene	Chr1:129237237-129237352 (+)
C3H/HeJ	ENSMUSG00175046471	snRNA gene	Chr1:128935568-128935683 (+)
C57BL/6NJ	ENSMUSG00215045950	snRNA gene	Chr1:128951270-128951385 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005039442	snRNA gene	Chr1:127857045-127857159 (+)
CBA/J	ENSMUSG00210028413	snRNA gene	Chr1:128832036-128832151 (+)
DBA/2J	ENSMUSG00185035331	snRNA gene	Chr1:133189030-133189145 (+)
FVB/NJ	ENSMUSG00205046003	snRNA gene	Chr1:128168413-128168528 (+)
JF1/MsJ	ENSUMUG00000051031	snRNA gene	Chr1:132351831-132351945 (+)
LP/J	ENSMUSG00230039302	snRNA gene	Chr1:132776341-132776456 (+)
NOD/ShiLtJ	ENSMUSG00190046932	snRNA gene	Chr1:128845448-128845563 (+)
NZO/HlLtJ	ENSMUSG00225021675	snRNA gene	Chr1:136497139-136497254 (+)
PWK/PhJ	ENSLUMG00010028674	snRNA gene	Chr1:127967205-127967319 (+)
SPRET/EiJ	ENSMSPG00010045834	snRNA gene	Chr1:130771136-130771250 (+)
WSB/EiJ	ENSIUOG00005049037	snRNA gene	Chr1:128577734-128577849 (+)

Homology

• Gene Tree
  Gm55850
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075658 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075658	Ensembl Gene Model | MGI Sequence Detail	116	C57BL/6J
transcript	ENSMUST00020183273	Ensembl | MGI Sequence Detail	116	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;