Gm55839 Gene Detail

Summary

• Symbol
  Gm55839
• Name
  predicted gene, 55839

• Feature Type
  miRNA gene
• IDs
  MGI:6848143
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:115076515-115076609 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  102 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848143	miRNA gene	Chr6:115076515-115076609 (+)
129S1/SvImJ	ENSMUSG00200026119	miRNA gene	Chr6:112291831-112291925 (+)
A/J	ENSMUSG00195017123	miRNA gene	Chr6:111682427-111682521 (+)
AKR/J	ENSMUSG00220037105	miRNA gene	Chr6:110594856-110594950 (+)
BALB/cJ	ENSMUSG00180002436	miRNA gene	Chr6:112048125-112048219 (+)
C3H/HeJ	ENSMUSG00175034200	miRNA gene	Chr6:65385937-65386031 (-)
C57BL/6NJ	ENSMUSG00215025808	miRNA gene	Chr6:112035223-112035317 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030186	miRNA gene	Chr6:111897343-111897437 (+)
CBA/J	ENSMUSG00210020925	miRNA gene	Chr6:111851873-111851967 (+)
DBA/2J	ENSMUSG00185049947	miRNA gene	Chr6:112490367-112490461 (+)
FVB/NJ	ENSMUSG00205028061	miRNA gene	Chr6:110918566-110918660 (+)
JF1/MsJ	ENSUMUG00000031578	miRNA gene	Chr6:111144586-111144680 (+)
LP/J	ENSMUSG00230048881	miRNA gene	Chr6:113694718-113694812 (+)
NOD/ShiLtJ	ENSMUSG00190018592	miRNA gene	Chr6:111444561-111444655 (+)
NZO/HlLtJ	ENSMUSG00225047979	miRNA gene	Chr6:115550421-115550515 (+)
PWK/PhJ	ENSLUMG00010028250	miRNA gene	Chr6:110447007-110447101 (+)
SPRET/EiJ	ENSMSPG00010047150	miRNA gene	Chr6:113239853-113239947 (+)
WSB/EiJ	ENSIUOG00005025794	miRNA gene	Chr6:112181207-112181301 (+)

Homology

• Gene Tree
  Gm55839
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075515 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075515	Ensembl Gene Model | MGI Sequence Detail	95	C57BL/6J
transcript	ENSMUST00020182824	Ensembl | MGI Sequence Detail	95	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;