Gm55834 Gene Detail

Summary

• Symbol
  Gm55834
• Name
  predicted gene, 55834

• Feature Type
  rRNA gene
• IDs
  MGI:6848134
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:94950887-94951000 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  91 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848134	rRNA gene	Chr4:94950887-94951000 (+)
129S1/SvImJ	ENSMUSG00200010437	rRNA gene	Chr4:89907466-89907579 (+)
A/J	ENSMUSG00195009248	rRNA gene	Chr4:90462585-90462698 (+)
AKR/J	ENSMUSG00220019924	rRNA gene	Chr4:89870846-89870959 (+)
BALB/cJ	ENSMUSG00180006166	rRNA gene	Chr4:89409888-89410001 (+)
C3H/HeJ	ENSMUSG00175008028	rRNA gene	Chr4:90349145-90349258 (+)
C57BL/6NJ	ENSMUSG00215016603	rRNA gene	Chr4:90320001-90320114 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019123	rRNA gene	Chr4:89717537-89717650 (+)
CBA/J	ENSMUSG00210016522	rRNA gene	Chr4:89925704-89925817 (+)
DBA/2J	ENSMUSG00185003079	rRNA gene	Chr4:90727845-90727958 (+)
FVB/NJ	ENSMUSG00205013744	rRNA gene	Chr4:88873571-88873684 (+)
JF1/MsJ	ENSUMUG00000003109	rRNA gene	Chr4:90835754-90835867 (+)
LP/J	ENSMUSG00230023020	rRNA gene	Chr4:94016499-94016612 (+)
NOD/ShiLtJ	ENSMUSG00190017838	rRNA gene	Chr4:89369997-89370110 (+)
NZO/HlLtJ	ENSMUSG00225003804	rRNA gene	Chr4:99171893-99172006 (+)
PWK/PhJ	ENSLUMG00010003613	rRNA gene	Chr4:88579019-88579132 (+)
SPRET/EiJ	ENSMSPG00010015678	rRNA gene	Chr4:90626246-90626359 (+)
WSB/EiJ	ENSIUOG00005012786	rRNA gene	Chr4:89694152-89694265 (+)

Homology

• Gene Tree
  Gm55834
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076977 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076977	Ensembl Gene Model | MGI Sequence Detail	114	C57BL/6J
transcript	ENSMUST00020183496	Ensembl | MGI Sequence Detail	114	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;