Gm55833 Gene Detail

Summary

• Symbol
  Gm55833
• Name
  predicted gene, 55833

• Feature Type
  miRNA gene
• IDs
  MGI:6848132
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:97982473-97982582 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  161 from dbSNP Build 142
• Strain Annotations
  27

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848132	miRNA gene	Chr8:97982473-97982582 (+)
129S1/SvImJ	ENSMUSG00200015096	miRNA gene	Chr8:92363833-92363942 (+)
A/J	ENSMUSG00195004054	miRNA gene	Chr8:92686887-92686996 (+)
AKR/J	ENSMUSG00220012093	miRNA gene	Chr8:92732322-92732431 (+)
BALB/cJ	ENSMUSG00180004129	miRNA gene	Chr8:92595455-92595564 (+)
C3H/HeJ	ENSMUSG00175002854	miRNA gene	Chr8:92668627-92668736 (+)
C57BL/6NJ	ENSMUSG00215001265	miRNA gene	Chr8:92255140-92255249 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005013622	miRNA gene	Chr1:137312404-137312512 (+)
CAST/EiJ	ENSTCUG00005009151	miRNA gene	Chr19:10399870-10399979 (+)
CAST/EiJ	ENSTCUG00005023501	miRNA gene	Chr8:92070696-92070805 (+)
CBA/J	ENSMUSG00210015420	miRNA gene	Chr8:92600532-92600641 (+)
DBA/2J	ENSMUSG00185024741	miRNA gene	Chr8:98709482-98709591 (+)
FVB/NJ	ENSMUSG00205017152	miRNA gene	Chr8:91668216-91668325 (+)
JF1/MsJ	ENSUMUG00000048594	miRNA gene	Chr8:101047163-101047272 (+)
LP/J	ENSMUSG00230008757	miRNA gene	Chr8:102329885-102329994 (+)
NOD/ShiLtJ	ENSMUSG00190013120	miRNA gene	Chr8:92707356-92707465 (+)
NZO/HlLtJ	ENSMUSG00225011879	miRNA gene	Chr8:105745723-105745832 (+)
PWK/PhJ	ENSLUMG00010004319	miRNA gene	Chr8:92468149-92468258 (+)
SPRET/EiJ	ENSMSPG00010003522	miRNA gene	Chr12:16229893-16230002 (+)
SPRET/EiJ	ENSMSPG00010006648	miRNA gene	Chr8:94550214-94550323 (+)
SPRET/EiJ	ENSMSPG00010010214	miRNA gene	Chr18:80152354-80152463 (-)
SPRET/EiJ	ENSMSPG00010027959	miRNA gene	Chr15:58523370-58523479 (-)
SPRET/EiJ	ENSMSPG00010000278	miRNA gene	Chr14:80366579-80366688 (+)
SPRET/EiJ	ENSMSPG00010044697	miRNA gene	Chr13:57916938-57917047 (-)
SPRET/EiJ	ENSMSPG00010025022	miRNA gene	Chr10:64112532-64112641 (-)
SPRET/EiJ	ENSMSPG00010026795	miRNA gene	ChrX:35281143-35281252 (-)
WSB/EiJ	ENSIUOG00005006055	miRNA gene	Chr8:93372767-93372876 (+)

Homology

• Gene Tree
  Gm55833
  

Sequences &
Gene Models

• All Sequences
  29

• Ensembl
  ENSMUSG00002076357 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076357	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020182261	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;