Gm55829 Gene Detail

Summary

• Symbol
  Gm55829
• Name
  predicted gene, 55829

• Feature Type
  rRNA gene
• IDs
  MGI:6848124
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:30379100-30379213 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848124	rRNA gene	Chr6:30379100-30379213 (+)
129S1/SvImJ	ENSMUSG00200036052	rRNA gene	Chr6:27430541-27430654 (+)
A/J	ENSMUSG00195009429	rRNA gene	Chr6:27393154-27393267 (+)
AKR/J	ENSMUSG00220003745	rRNA gene	Chr6:26986225-26986338 (+)
BALB/cJ	ENSMUSG00180022445	rRNA gene	Chr6:27524794-27524907 (+)
C3H/HeJ	ENSMUSG00175020526	rRNA gene	Chr6:27388002-27388115 (+)
C57BL/6NJ	ENSMUSG00215028409	rRNA gene	Chr6:27431348-27431461 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005027707	rRNA gene	Chr6:26982864-26982977 (+)
CBA/J	ENSMUSG00210004392	rRNA gene	Chr6:27409171-27409284 (+)
DBA/2J	ENSMUSG00185022230	rRNA gene	Chr6:27503727-27503840 (+)
FVB/NJ	ENSMUSG00205034181	rRNA gene	Chr6:27478224-27478337 (+)
JF1/MsJ	ENSUMUG00000041798	rRNA gene	Chr6:27214878-27214991 (+)
LP/J	ENSMUSG00230030855	rRNA gene	Chr6:28447115-28447228 (+)
NOD/ShiLtJ	ENSMUSG00190031565	rRNA gene	Chr6:27272755-27272868 (+)
NZO/HlLtJ	ENSMUSG00225014743	rRNA gene	Chr6:30408097-30408210 (+)
PWK/PhJ	ENSLUMG00010026163	rRNA gene	Chr6:26983941-26984054 (+)
SPRET/EiJ	ENSMSPG00010022978	rRNA gene	Chr6:27410028-27410141 (+)
WSB/EiJ	ENSIUOG00005033809	rRNA gene	Chr6:27582565-27582678 (+)

Homology

• Gene Tree
  Gm55829
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074950 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074950	Ensembl Gene Model | MGI Sequence Detail	114	C57BL/6J
transcript	ENSMUST00020183684	Ensembl | MGI Sequence Detail	114	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;