Gm55826 Gene Detail

Summary

• Symbol
  Gm55826
• Name
  predicted gene, 55826

• Feature Type
  rRNA gene
• IDs
  MGI:6848118
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:30347370-30347465 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  80 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848118	rRNA gene	Chr6:30347370-30347465 (-)
129S1/SvImJ	ENSMUSG00200036047	rRNA gene	Chr6:27398807-27398902 (-)
A/J	ENSMUSG00195009422	rRNA gene	Chr6:27361422-27361517 (-)
AKR/J	ENSMUSG00220003741	rRNA gene	Chr6:26954491-26954586 (-)
BALB/cJ	ENSMUSG00180022426	rRNA gene	Chr6:27493060-27493155 (-)
C3H/HeJ	ENSMUSG00175020521	rRNA gene	Chr6:27356265-27356360 (-)
C57BL/6NJ	ENSMUSG00215028317	rRNA gene	Chr6:27399616-27399711 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005027729	rRNA gene	Chr6:26950963-26951058 (-)
CBA/J	ENSMUSG00210004389	rRNA gene	Chr6:27377436-27377531 (-)
DBA/2J	ENSMUSG00185022223	rRNA gene	Chr6:27471995-27472090 (-)
FVB/NJ	ENSMUSG00205034138	rRNA gene	Chr6:27446488-27446583 (-)
JF1/MsJ	ENSUMUG00000041769	rRNA gene	Chr6:27170913-27171008 (-)
LP/J	ENSMUSG00230030508	rRNA gene	Chr6:28415384-28415479 (-)
NOD/ShiLtJ	ENSMUSG00190031533	rRNA gene	Chr6:27241022-27241117 (-)
NZO/HlLtJ	ENSMUSG00225014635	rRNA gene	Chr6:30376366-30376461 (-)
PWK/PhJ	ENSLUMG00010026177	rRNA gene	Chr6:26947180-26947275 (-)
SPRET/EiJ	ENSMSPG00010022964	rRNA gene	Chr6:27378627-27378722 (-)
WSB/EiJ	ENSIUOG00005033797	rRNA gene	Chr6:27550877-27550972 (-)

Homology

• Gene Tree
  Gm55826
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076836 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076836	Ensembl Gene Model | MGI Sequence Detail	96	C57BL/6J
transcript	ENSMUST00020182991	Ensembl | MGI Sequence Detail	96	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;