Gm55824 Gene Detail

Summary

• Symbol
  Gm55824
• Name
  predicted gene, 55824

• Feature Type
  miRNA gene
• IDs
  MGI:6848114
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:136911298-136911373 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848114	miRNA gene	Chr4:136911298-136911373 (+)
129S1/SvImJ	ENSMUSG00200021532	miRNA gene	Chr4:130329174-130329249 (+)
A/J	ENSMUSG00195044986	miRNA gene	Chr4:131685712-131685787 (+)
AKR/J	ENSMUSG00220047899	miRNA gene	Chr4:130677450-130677525 (+)
BALB/cJ	ENSMUSG00180049768	miRNA gene	Chr4:129319754-129319829 (+)
C3H/HeJ	ENSMUSG00175046673	miRNA gene	Chr4:130340073-130340148 (+)
C57BL/6NJ	ENSMUSG00215051202	miRNA gene	Chr4:131852040-131852115 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048451	miRNA gene	Chr4:131263097-131263172 (+)
CBA/J	ENSMUSG00210053921	miRNA gene	Chr4:129963993-129964068 (+)
DBA/2J	ENSMUSG00185053200	miRNA gene	Chr4:131493056-131493131 (+)
FVB/NJ	ENSMUSG00205048458	miRNA gene	Chr4:129733573-129733648 (+)
JF1/MsJ	ENSUMUG00000046609	miRNA gene	Chr4:132186124-132186199 (+)
LP/J	ENSMUSG00230041773	miRNA gene	Chr4:135267282-135267357 (+)
NOD/ShiLtJ	ENSMUSG00190050544	miRNA gene	Chr4:129725180-129725255 (+)
NZO/HlLtJ	ENSMUSG00225026868	miRNA gene	Chr4:141222441-141222516 (+)
PWK/PhJ	ENSLUMG00010050823	miRNA gene	Chr4:129175349-129175424 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005043961	miRNA gene	Chr4:129620160-129620235 (+)

Homology

• Gene Tree
  Gm55824
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002076872 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076872	Ensembl Gene Model | MGI Sequence Detail	76	C57BL/6J
transcript	ENSMUST00020183152	Ensembl | MGI Sequence Detail	76	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;