Gm55820 Gene Detail

Summary

• Symbol
  Gm55820
• Name
  predicted gene, 55820

• Feature Type
  miRNA gene
• IDs
  MGI:6848106
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:120808132-120808208 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  56 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848106	miRNA gene	Chr2:120808132-120808208 (-)
129S1/SvImJ	ENSMUSG00200048897	miRNA gene	Chr2:117739789-117739865 (-)
A/J	ENSMUSG00195025581	miRNA gene	Chr2:117780710-117780786 (-)
AKR/J	ENSMUSG00220043868	miRNA gene	Chr2:117704062-117704138 (-)
BALB/cJ	ENSMUSG00180045553	miRNA gene	Chr2:117581345-117581421 (-)
C3H/HeJ	ENSMUSG00175028136	miRNA gene	Chr2:118055663-118055739 (-)
C57BL/6NJ	ENSMUSG00215030288	miRNA gene	Chr2:117726426-117726502 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017312	miRNA gene	Chr2:116990532-116990608 (-)
CBA/J	ENSMUSG00210007600	miRNA gene	Chr2:117896598-117896674 (-)
DBA/2J	ENSMUSG00185049167	miRNA gene	Chr2:117578680-117578756 (-)
FVB/NJ	ENSMUSG00205044780	miRNA gene	Chr2:116804714-116804790 (-)
JF1/MsJ	ENSUMUG00000044359	miRNA gene	Chr2:117474554-117474630 (-)
LP/J	ENSMUSG00230023953	miRNA gene	Chr2:119399406-119399482 (-)
NOD/ShiLtJ	ENSMUSG00190047077	miRNA gene	Chr2:117824812-117824888 (-)
NZO/HlLtJ	ENSMUSG00225004504	miRNA gene	Chr2:127303193-127303269 (-)
PWK/PhJ	ENSLUMG00010048200	miRNA gene	Chr2:117366941-117367017 (-)
SPRET/EiJ	ENSMSPG00010045859	miRNA gene	Chr2:119806905-119806981 (-)
WSB/EiJ	ENSIUOG00005029571	miRNA gene	Chr2:117552696-117552772 (-)

Homology

• Gene Tree
  Gm55820
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075710 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075710	Ensembl Gene Model | MGI Sequence Detail	77	C57BL/6J
transcript	ENSMUST00020183634	Ensembl | MGI Sequence Detail	77	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;