Gm55818 Gene Detail

Summary

• Symbol
  Gm55818
• Name
  predicted gene, 55818

• Feature Type
  miRNA gene
• IDs
  MGI:6848102
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:146104889-146104972 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  182 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848102	miRNA gene	Chr3:146104889-146104972 (-)
129S1/SvImJ	ENSMUSG00200004151	miRNA gene	Chr3:143023584-143023667 (-)
A/J	ENSMUSG00195003456	miRNA gene	Chr3:143137559-143137642 (-)
AKR/J	ENSMUSG00220000442	miRNA gene	Chr3:141551441-141551526 (-)
BALB/cJ	ENSMUSG00180027170	miRNA gene	Chr3:143007951-143008034 (-)
C3H/HeJ	ENSMUSG00175020303	miRNA gene	Chr3:142589973-142590056 (-)
C57BL/6NJ	ENSMUSG00215020962	miRNA gene	Chr3:143291149-143291232 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005001263	miRNA gene	Chr3:143681020-143681101 (+)
CBA/J	ENSMUSG00210004892	miRNA gene	Chr3:143267354-143267437 (-)
DBA/2J	ENSMUSG00185025868	miRNA gene	Chr3:143856564-143856649 (-)
FVB/NJ	ENSMUSG00205024104	miRNA gene	Chr3:142131236-142131319 (-)
JF1/MsJ	ENSUMUG00000034832	miRNA gene	Chr3:142660376-142660457 (-)
LP/J	ENSMUSG00230020195	miRNA gene	Chr3:145776977-145777062 (-)
NOD/ShiLtJ	ENSMUSG00190004581	miRNA gene	Chr3:144227688-144227771 (-)
NZO/HlLtJ	ENSMUSG00225003112	miRNA gene	Chr3:148287502-148287585 (-)
PWK/PhJ	ENSLUMG00010022576	miRNA gene	Chr3:142569162-142569241 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005015413	miRNA gene	Chr3:143317905-143317990 (-)

Homology

• Gene Tree
  Gm55818
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075872 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075872	Ensembl Gene Model | MGI Sequence Detail	84	C57BL/6J
transcript	ENSMUST00020182892	Ensembl | MGI Sequence Detail	84	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;