Gm55817 Gene Detail

Summary

• Symbol
  Gm55817
• Name
  predicted gene, 55817

• Feature Type
  miRNA gene
• IDs
  MGI:6848100
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:125556441-125556517 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  83 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848100	miRNA gene	Chr5:125556441-125556517 (+)
129S1/SvImJ	ENSMUSG00200031571	miRNA gene	Chr5:119286810-119286886 (+)
A/J	ENSMUSG00195013105	miRNA gene	Chr5:118808499-118808575 (+)
AKR/J	ENSMUSG00220047187	miRNA gene	Chr5:118313066-118313142 (+)
BALB/cJ	ENSMUSG00180040048	miRNA gene	Chr5:118923387-118923463 (+)
C3H/HeJ	ENSMUSG00175034313	miRNA gene	Chr5:120919165-120919241 (+)
C57BL/6NJ	ENSMUSG00215044187	miRNA gene	Chr5:118967933-118968009 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005041389	miRNA gene	Chr5:118204475-118204551 (+)
CBA/J	ENSMUSG00210010559	miRNA gene	Chr5:119670105-119670181 (+)
DBA/2J	ENSMUSG00185008573	miRNA gene	Chr5:122721145-122721221 (+)
FVB/NJ	ENSMUSG00205046479	miRNA gene	Chr5:118595242-118595318 (+)
JF1/MsJ	ENSUMUG00000053031	miRNA gene	Chr5:125589777-125589853 (+)
LP/J	ENSMUSG00230048151	miRNA gene	Chr5:126808591-126808667 (+)
NOD/ShiLtJ	ENSMUSG00190047383	miRNA gene	Chr5:118595500-118595576 (+)
NZO/HlLtJ	ENSMUSG00225014544	miRNA gene	Chr5:134505374-134505450 (+)
PWK/PhJ	ENSLUMG00010043759	miRNA gene	Chr5:117486706-117486782 (+)
SPRET/EiJ	ENSMSPG00010032398	miRNA gene	Chr5:120778834-120778910 (+)
WSB/EiJ	ENSIUOG00005020735	miRNA gene	Chr5:121301865-121301941 (+)

Homology

• Gene Tree
  Gm55817
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076951 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076951	Ensembl Gene Model | MGI Sequence Detail	77	C57BL/6J
transcript	ENSMUST00020183573	Ensembl | MGI Sequence Detail	77	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;