Gm55813 Gene Detail

Summary

• Symbol
  Gm55813
• Name
  predicted gene, 55813

• Feature Type
  miRNA gene
• IDs
  MGI:6848092
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:74368024-74368133 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  103 from dbSNP Build 142
• Strain Annotations
  45

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848092	miRNA gene	Chr8:74368024-74368133 (-)
129S1/SvImJ	ENSMUSG00200031586	miRNA gene	Chr4:96691186-96691294 (-)
129S1/SvImJ	ENSMUSG00200033519	miRNA gene	Chr8:68713419-68713528 (-)
A/J	ENSMUSG00195009149	miRNA gene	Chr4:97241435-97241543 (-)
A/J	ENSMUSG00195018433	miRNA gene	Chr8:69079984-69080093 (-)
AKR/J	ENSMUSG00220007029	miRNA gene	Chr4:96680987-96681095 (-)
AKR/J	ENSMUSG00220025736	miRNA gene	Chr8:69188192-69188301 (-)
BALB/cJ	ENSMUSG00180029426	miRNA gene	Chr8:68909092-68909201 (-)
BALB/cJ	ENSMUSG00180035696	miRNA gene	Chr4:96166810-96166918 (-)
C3H/HeJ	ENSMUSG00175022931	miRNA gene	Chr8:69047231-69047340 (-)
C3H/HeJ	ENSMUSG00175015914	miRNA gene	Chr4:97160508-97160616 (-)
C57BL/6NJ	ENSMUSG00215041652	miRNA gene	Chr13:58131453-58131561 (-)
C57BL/6NJ	ENSMUSG00215024837	miRNA gene	Chr4:97078387-97078495 (-)
C57BL/6NJ	ENSMUSG00215037732	miRNA gene	Chr8:68640821-68640930 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007840	miRNA gene	Chr4:96333034-96333142 (-)
CAST/EiJ	ENSTCUG00005040649	miRNA gene	Chr8:68613008-68613117 (-)
CAST/EiJ	ENSTCUG00005049718	miRNA gene	Chr7:34656439-34656545 (+)
CAST/EiJ	ENSTCUG00005037710	miRNA gene	Chr9:106221218-106221323 (-)
CBA/J	ENSMUSG00210030185	miRNA gene	Chr4:96702769-96702877 (-)
CBA/J	ENSMUSG00210035416	miRNA gene	Chr8:68958850-68958959 (-)
DBA/2J	ENSMUSG00185023172	miRNA gene	Chr4:97475499-97475607 (-)
DBA/2J	ENSMUSG00185013420	miRNA gene	Chr8:75114341-75114450 (-)
DBA/2J	ENSMUSG00185001481	miRNA gene	Chr4:15291663-15291772 (+)
DBA/2J	ENSMUSG00185051518	miRNA gene	Chr7:35877471-35877580 (+)
FVB/NJ	ENSMUSG00205016871	miRNA gene	Chr4:95669978-95670086 (-)
FVB/NJ	ENSMUSG00205043779	miRNA gene	Chr8:68223468-68223577 (-)
JF1/MsJ	ENSUMUG00000043312	miRNA gene	Chr13:58564853-58564961 (-)
JF1/MsJ	ENSUMUG00000056521	miRNA gene	Chr10:74188694-74188803 (-)
JF1/MsJ	ENSUMUG00000041860	miRNA gene	Chr8:77420355-77420464 (-)
JF1/MsJ	ENSUMUG00000044442	miRNA gene	Chr4:97551878-97551986 (-)
LP/J	ENSMUSG00230034737	miRNA gene	Chr8:78744555-78744664 (-)
LP/J	ENSMUSG00230023738	miRNA gene	Chr4:100780625-100780733 (-)
NOD/ShiLtJ	ENSMUSG00190046816	miRNA gene	Chr6:66501523-66501632 (-)
NOD/ShiLtJ	ENSMUSG00190035464	miRNA gene	Chr4:96137476-96137584 (-)
NOD/ShiLtJ	ENSMUSG00190026925	miRNA gene	Chr4:15178482-15178591 (+)
NOD/ShiLtJ	ENSMUSG00190033360	miRNA gene	Chr8:68962510-68962619 (-)
NZO/HlLtJ	ENSMUSG00225023480	miRNA gene	Chr8:82125892-82126001 (-)
NZO/HlLtJ	ENSMUSG00225048603	miRNA gene	Chr13:62227646-62227754 (-)
NZO/HlLtJ	ENSMUSG00225033363	miRNA gene	Chr4:105902576-105902684 (-)
PWK/PhJ	ENSLUMG00010036674	miRNA gene	Chr8:68831286-68831395 (-)
SPRET/EiJ	ENSMSPG00010044689	miRNA gene	Chr13:57859262-57859370 (-)
SPRET/EiJ	ENSMSPG00010042881	miRNA gene	Chr8:70573242-70573351 (-)
SPRET/EiJ	ENSMSPG00010007243	miRNA gene	Chr10:5615456-5615565 (+)
WSB/EiJ	ENSIUOG00005026597	miRNA gene	Chr8:69719630-69719739 (-)
WSB/EiJ	ENSIUOG00005003334	miRNA gene	Chr4:96429582-96429690 (-)

Homology

• Gene Tree
  Gm55813
  

Sequences &
Gene Models

• All Sequences
  47

• Ensembl
  ENSMUSG00002075694 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075694	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020181719	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;