Gm55809 Gene Detail

Summary

• Symbol
  Gm55809
• Name
  predicted gene, 55809

• Feature Type
  miRNA gene
• IDs
  MGI:6848084
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:73410942-73411066 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  56 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848084	miRNA gene	Chr8:73410942-73411066 (+)
129S1/SvImJ	ENSMUSG00200033455	miRNA gene	Chr8:67777300-67777424 (+)
A/J	ENSMUSG00195017663	miRNA gene	Chr8:68122823-68122947 (+)
AKR/J	ENSMUSG00220025446	miRNA gene	Chr8:68255886-68256010 (+)
BALB/cJ	ENSMUSG00180029084	miRNA gene	Chr8:67961034-67961158 (+)
C3H/HeJ	ENSMUSG00175022428	miRNA gene	Chr8:68099056-68099180 (+)
C57BL/6NJ	ENSMUSG00215039194	miRNA gene	Chr8:67683715-67683839 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005039713	miRNA gene	Chr8:67709266-67709390 (+)
CBA/J	ENSMUSG00210035264	miRNA gene	Chr8:68005913-68006037 (+)
DBA/2J	ENSMUSG00185013354	miRNA gene	Chr8:74166309-74166433 (+)
FVB/NJ	ENSMUSG00205042333	miRNA gene	Chr8:67256007-67256131 (+)
JF1/MsJ	ENSUMUG00000040365	miRNA gene	Chr8:76488161-76488285 (+)
LP/J	ENSMUSG00230034743	miRNA gene	Chr8:77812305-77812429 (+)
NOD/ShiLtJ	ENSMUSG00190032729	miRNA gene	Chr8:67995706-67995830 (+)
NZO/HlLtJ	ENSMUSG00225023485	miRNA gene	Chr8:81177890-81178014 (+)
PWK/PhJ	ENSLUMG00010034754	miRNA gene	Chr8:67891777-67891901 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005027549	miRNA gene	Chr8:68771183-68771307 (+)

Homology

• Gene Tree
  Gm55809
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002076058 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076058	Ensembl Gene Model | MGI Sequence Detail	125	C57BL/6J
transcript	ENSMUST00020183198	Ensembl | MGI Sequence Detail	125	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;