Gm55808 Gene Detail

Summary

• Symbol
  Gm55808
• Name
  predicted gene, 55808

• Feature Type
  miRNA gene
• IDs
  MGI:6848082
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:155874038-155874163 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848082	miRNA gene	Chr4:155874038-155874163 (+)
129S1/SvImJ	ENSMUSG00200020007	miRNA gene	Chr4:146928489-146928614 (+)
A/J	ENSMUSG00195020979	miRNA gene	Chr4:148594597-148594722 (+)
AKR/J	ENSMUSG00220027418	miRNA gene	Chr4:148169984-148170109 (+)
BALB/cJ	ENSMUSG00180002576	miRNA gene	Chr4:146249160-146249285 (+)
C3H/HeJ	ENSMUSG00175019881	miRNA gene	Chr4:149549773-149549898 (+)
C57BL/6NJ	ENSMUSG00215026528	miRNA gene	Chr4:148396824-148396949 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035250	miRNA gene	Chr4:152253733-152253858 (+)
CBA/J	ENSMUSG00210006061	miRNA gene	Chr4:148208131-148208256 (+)
DBA/2J	ENSMUSG00185016814	miRNA gene	Chr4:151765669-151765794 (+)
FVB/NJ	ENSMUSG00205021916	miRNA gene	Chr4:146669970-146670095 (+)
JF1/MsJ	ENSUMUG00000000446	miRNA gene	Chr4:154798419-154798544 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190004156	miRNA gene	Chr4:147873763-147873888 (+)
NZO/HlLtJ	ENSMUSG00225024711	miRNA gene	Chr4:162488287-162488412 (+)
PWK/PhJ	ENSLUMG00010027878	miRNA gene	Chr4:147050853-147050978 (+)
SPRET/EiJ	ENSMSPG00010024698	miRNA gene	Chr4:148996867-148996992 (+)
WSB/EiJ	ENSIUOG00005006763	miRNA gene	Chr4:146082446-146082571 (+)

Homology

• Gene Tree
  Gm55808
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075881 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075881	Ensembl Gene Model | MGI Sequence Detail	126	C57BL/6J
transcript	ENSMUST00020182935	Ensembl | MGI Sequence Detail	126	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;