Gm55806 Gene Detail

Summary

• Symbol
  Gm55806
• Name
  predicted gene, 55806

• Feature Type
  miRNA gene
• IDs
  MGI:6848078
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:49786558-49786672 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  116 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848078	miRNA gene	Chr11:49786558-49786672 (+)
129S1/SvImJ	ENSMUSG00200040811	miRNA gene	Chr11:46764966-46765080 (+)
A/J	ENSMUSG00195037834	miRNA gene	Chr11:46715753-46715867 (+)
AKR/J	ENSMUSG00220040858	miRNA gene	Chr11:46902404-46902514 (+)
BALB/cJ	ENSMUSG00180038645	miRNA gene	Chr11:46777234-46777348 (+)
C3H/HeJ	ENSMUSG00175038712	miRNA gene	Chr11:46747387-46747501 (+)
C57BL/6NJ	ENSMUSG00215036646	miRNA gene	Chr11:46674205-46674319 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005044256	miRNA gene	Chr11:46299930-46300034 (+)
CBA/J	ENSMUSG00210029878	miRNA gene	Chr11:46603349-46603463 (+)
DBA/2J	ENSMUSG00185028184	miRNA gene	Chr11:46857536-46857650 (+)
FVB/NJ	ENSMUSG00205037076	miRNA gene	Chr11:46645143-46645257 (+)
JF1/MsJ	ENSUMUG00000041464	miRNA gene	Chr11:47116338-47116444 (+)
LP/J	ENSMUSG00230034064	miRNA gene	Chr11:47996692-47996806 (+)
NOD/ShiLtJ	ENSMUSG00190044950	miRNA gene	Chr11:46861966-46862080 (+)
NZO/HlLtJ	ENSMUSG00225036222	miRNA gene	Chr11:49980911-49981021 (+)
PWK/PhJ	ENSLUMG00010034494	miRNA gene	Chr11:46626361-46626473 (+)
SPRET/EiJ	ENSMSPG00010020746	miRNA gene	Chr11:47295631-47295727 (+)
WSB/EiJ	ENSIUOG00005040415	miRNA gene	Chr11:46660827-46660939 (+)

Homology

• Gene Tree
  Gm55806
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074879 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074879	Ensembl Gene Model | MGI Sequence Detail	115	C57BL/6J
transcript	ENSMUST00020183160	Ensembl | MGI Sequence Detail	115	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;