Gm55805 Gene Detail

Summary

• Symbol
  Gm55805
• Name
  predicted gene, 55805

• Feature Type
  rRNA gene
• IDs
  MGI:6848076
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:87258131-87258242 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  101 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848076	rRNA gene	Chr6:87258131-87258242 (+)
129S1/SvImJ	ENSMUSG00200045913	rRNA gene	Chr6:84223385-84223496 (+)
A/J	ENSMUSG00195040979	rRNA gene	Chr6:83902474-83902585 (+)
AKR/J	ENSMUSG00220037536	rRNA gene	Chr6:82811732-82811843 (+)
BALB/cJ	ENSMUSG00180020095	rRNA gene	Chr6:84284923-84285034 (+)
C3H/HeJ	ENSMUSG00175040601	rRNA gene	Chr6:93121757-93121868 (-)
C57BL/6NJ	ENSMUSG00215036032	rRNA gene	Chr6:84284172-84284283 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005018479	rRNA gene	Chr6:84221730-84221841 (+)
CBA/J	ENSMUSG00210046406	rRNA gene	Chr6:84098556-84098667 (+)
DBA/2J	ENSMUSG00185046852	rRNA gene	Chr6:84645687-84645798 (+)
FVB/NJ	ENSMUSG00205039842	rRNA gene	Chr6:83271304-83271415 (+)
JF1/MsJ	ENSUMUG00000045058	rRNA gene	Chr6:83587009-83587120 (+)
LP/J	ENSMUSG00230050880	rRNA gene	Chr6:85779889-85780000 (+)
NOD/ShiLtJ	ENSMUSG00190046352	rRNA gene	Chr6:83717035-83717146 (+)
NZO/HlLtJ	ENSMUSG00225019911	rRNA gene	Chr6:87746644-87746755 (+)
PWK/PhJ	ENSLUMG00010037480	rRNA gene	Chr6:83002899-83003010 (+)
SPRET/EiJ	ENSMSPG00010045353	rRNA gene	Chr6:85135683-85135794 (+)
WSB/EiJ	ENSIUOG00005032510	rRNA gene	Chr6:84629381-84629492 (+)

Homology

• Gene Tree
  Gm55805
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074885 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074885	Ensembl Gene Model | MGI Sequence Detail	112	C57BL/6J
transcript	ENSMUST00020182443	Ensembl | MGI Sequence Detail	112	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;