Gm55802 Gene Detail

Summary

• Symbol
  Gm55802
• Name
  predicted gene, 55802

• Feature Type
  rRNA gene
• IDs
  MGI:6848070
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:62422311-62422419 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848070	rRNA gene	Chr9:62422311-62422419 (+)
129S1/SvImJ	ENSMUSG00200036198	rRNA gene	Chr9:59531653-59531761 (+)
A/J	ENSMUSG00195042923	rRNA gene	Chr9:59237551-59237659 (+)
AKR/J	ENSMUSG00220033016	rRNA gene	Chr9:59393085-59393193 (+)
BALB/cJ	ENSMUSG00180019849	rRNA gene	Chr9:59370948-59371056 (+)
C3H/HeJ	ENSMUSG00175022826	rRNA gene	Chr9:59370705-59370813 (+)
C57BL/6NJ	ENSMUSG00215035771	rRNA gene	Chr9:59358130-59358238 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005021534	rRNA gene	Chr9:59288162-59288270 (+)
CBA/J	ENSMUSG00210043407	rRNA gene	Chr9:59460517-59460625 (+)
DBA/2J	ENSMUSG00185044195	rRNA gene	Chr9:59485266-59485374 (+)
FVB/NJ	ENSMUSG00205044785	rRNA gene	Chr9:59807985-59808093 (+)
JF1/MsJ	ENSUMUG00000049636	rRNA gene	Chr9:59535419-59535527 (+)
LP/J	ENSMUSG00230039781	rRNA gene	Chr9:59731011-59731119 (+)
NOD/ShiLtJ	ENSMUSG00190045228	rRNA gene	Chr9:59567203-59567311 (+)
NZO/HlLtJ	ENSMUSG00225028468	rRNA gene	Chr9:59793573-59793681 (+)
PWK/PhJ	ENSLUMG00010039870	rRNA gene	Chr9:59500719-59500827 (+)
SPRET/EiJ	ENSMSPG00010027798	rRNA gene	Chr9:60572531-60572639 (+)
WSB/EiJ	ENSIUOG00005041650	rRNA gene	Chr9:58973173-58973281 (+)

Homology

• Gene Tree
  Gm55802
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075135 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075135	Ensembl Gene Model | MGI Sequence Detail	109	C57BL/6J
transcript	ENSMUST00020182388	Ensembl | MGI Sequence Detail	109	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;