Gm55789 Gene Detail

Summary

• Symbol
  Gm55789
• Name
  predicted gene, 55789

• Feature Type
  rRNA gene
• IDs
  MGI:6848044
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:102888616-102888719 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  115 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848044	rRNA gene	Chr9:102888616-102888719 (-)
129S1/SvImJ	ENSMUSG00200017283	rRNA gene	Chr9:100048952-100049055 (-)
A/J	ENSMUSG00195021070	rRNA gene	Chr9:99265813-99265916 (-)
AKR/J	ENSMUSG00220040164	rRNA gene	Chr9:99656489-99656592 (-)
BALB/cJ	ENSMUSG00180025777	rRNA gene	Chr9:99582498-99582601 (-)
C3H/HeJ	ENSMUSG00175013143	rRNA gene	Chr9:99925134-99925237 (-)
C57BL/6NJ	ENSMUSG00215024704	rRNA gene	Chr9:99925921-99926024 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005013383	rRNA gene	Chr9:99712002-99712105 (-)
CBA/J	ENSMUSG00210015794	rRNA gene	Chr9:99781522-99781625 (-)
DBA/2J	ENSMUSG00185012233	rRNA gene	Chr9:99932378-99932481 (-)
FVB/NJ	ENSMUSG00205034000	rRNA gene	Chr9:99936198-99936301 (-)
JF1/MsJ	ENSUMUG00000047732	rRNA gene	Chr9:99756214-99756317 (-)
LP/J	ENSMUSG00230020346	rRNA gene	Chr9:100080424-100080527 (-)
NOD/ShiLtJ	ENSMUSG00190038066	rRNA gene	Chr9:99568108-99568211 (-)
NZO/HlLtJ	ENSMUSG00225020874	rRNA gene	Chr9:100300996-100301099 (-)
PWK/PhJ	ENSLUMG00010027652	rRNA gene	Chr9:99686052-99686155 (-)
SPRET/EiJ	ENSMSPG00010046987	rRNA gene	Chr9:101565309-101565412 (-)
WSB/EiJ	ENSIUOG00005025137	rRNA gene	Chr9:99000013-99000116 (-)

Homology

• Gene Tree
  Gm55789
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075362 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075362	Ensembl Gene Model | MGI Sequence Detail	104	C57BL/6J
transcript	ENSMUST00020183492	Ensembl | MGI Sequence Detail	104	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;