Gm55780 Gene Detail

Summary

• Symbol
  Gm55780
• Name
  predicted gene, 55780

• Feature Type
  miRNA gene
• IDs
  MGI:6848026
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:28745306-28745431 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  28 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848026	miRNA gene	Chr17:28745306-28745431 (+)
129S1/SvImJ	ENSMUSG00200053899	miRNA gene	Chr17:24403607-24403732 (+)
A/J	ENSMUSG00195054674	miRNA gene	Chr17:25219961-25220086 (+)
AKR/J	ENSMUSG00220053946	miRNA gene	Chr17:24267605-24267730 (+)
BALB/cJ	ENSMUSG00180051875	miRNA gene	Chr17:24706082-24706207 (+)
C3H/HeJ	ENSMUSG00175054211	miRNA gene	Chr17:24256026-24256151 (+)
C57BL/6NJ	ENSMUSG00215054430	miRNA gene	Chr17:24256074-24256199 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005050253	miRNA gene	Chr17:24999442-24999567 (+)
CBA/J	ENSMUSG00210051318	miRNA gene	Chr17:24094460-24094585 (+)
DBA/2J	ENSMUSG00185054138	miRNA gene	Chr17:26309482-26309607 (+)
FVB/NJ	ENSMUSG00205053375	miRNA gene	Chr17:24571002-24571127 (+)
JF1/MsJ	ENSUMUG00000057944	miRNA gene	Chr17:25774376-25774501 (+)
LP/J	ENSMUSG00230055209	miRNA gene	Chr17:27829413-27829538 (+)
NOD/ShiLtJ	ENSMUSG00190054450	miRNA gene	Chr17:24203383-24203508 (+)
NZO/HlLtJ	ENSMUSG00225054558	miRNA gene	Chr17:29797353-29797478 (+)
PWK/PhJ	ENSLUMG00010053370	miRNA gene	Chr17:23697055-23697180 (+)
SPRET/EiJ	ENSMSPG00010051102	miRNA gene	Chr17:24985964-24986090 (+)
WSB/EiJ	ENSIUOG00005052159	miRNA gene	Chr17:24963778-24963903 (+)

Homology

• Gene Tree
  Gm55780
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076476 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076476	Ensembl Gene Model | MGI Sequence Detail	126	C57BL/6J
transcript	ENSMUST00020182849	Ensembl | MGI Sequence Detail	126	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;