Gm55778 Gene Detail

Summary

• Symbol
  Gm55778
• Name
  predicted gene, 55778

• Feature Type
  rRNA gene
• IDs
  MGI:6848022
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:31161806-31161943 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848022	rRNA gene	Chr1:31161806-31161943 (-)
129S1/SvImJ	ENSMUSG00200001191	rRNA gene	Chr1:28661476-28661613 (-)
A/J	ENSMUSG00195000114	rRNA gene	Chr1:28380176-28380313 (-)
AKR/J	ENSMUSG00220000744	rRNA gene	Chr1:28374609-28374746 (-)
BALB/cJ	ENSMUSG00180001166	rRNA gene	Chr1:28470524-28470661 (-)
C3H/HeJ	ENSMUSG00175000715	rRNA gene	Chr1:28380180-28380317 (-)
C57BL/6NJ	ENSMUSG00215001101	rRNA gene	Chr1:28463273-28463410 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210010907	rRNA gene	Chr1:28239735-28239872 (-)
DBA/2J	ENSMUSG00185016775	rRNA gene	Chr1:29305416-29305553 (-)
FVB/NJ	ENSMUSG00205007099	rRNA gene	Chr1:28394315-28394452 (-)
JF1/MsJ	ENSUMUG00000000366	rRNA gene	Chr1:28495584-28495721 (-)
LP/J	ENSMUSG00230000545	rRNA gene	Chr1:29331859-29331996 (-)
NOD/ShiLtJ	ENSMUSG00190000081	rRNA gene	Chr1:28376302-28376439 (-)
NZO/HlLtJ	ENSMUSG00225014586	rRNA gene	Chr1:32604752-32604889 (-)
PWK/PhJ	ENSLUMG00010000286	rRNA gene	Chr1:28118432-28118569 (-)
SPRET/EiJ	ENSMSPG00010000877	rRNA gene	Chr1:29349580-29349717 (-)
WSB/EiJ	ENSIUOG00005001926	rRNA gene	Chr1:28370525-28370662 (-)

Homology

• Gene Tree
  Gm55778
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002076113 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076113	Ensembl Gene Model | MGI Sequence Detail	138	C57BL/6J
transcript	ENSMUST00020182636	Ensembl | MGI Sequence Detail	138	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;