Gm55772 Gene Detail

Summary

• Symbol
  Gm55772
• Name
  predicted gene, 55772

• Feature Type
  miRNA gene
• IDs
  MGI:6848010
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:30372372-30372478 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  70 from dbSNP Build 142
• Strain Annotations
  30

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848010	miRNA gene	Chr1:30372372-30372478 (-)
129S1/SvImJ	ENSMUSG00200001084	miRNA gene	Chr1:27856762-27856868 (-)
A/J	ENSMUSG00195000083	miRNA gene	Chr1:27596517-27596623 (-)
AKR/J	ENSMUSG00220031901	miRNA gene	Chr6:139063697-139063795 (-)
AKR/J	ENSMUSG00220006274	miRNA gene	Chr8:39699941-39700047 (-)
AKR/J	ENSMUSG00220026682	miRNA gene	Chr8:24728493-24728596 (-)
AKR/J	ENSMUSG00220000205	miRNA gene	Chr1:97499351-97499457 (-)
BALB/cJ	ENSMUSG00180001129	miRNA gene	Chr1:27682876-27682982 (-)
C3H/HeJ	ENSMUSG00175000748	miRNA gene	Chr1:27596577-27596683 (-)
C57BL/6NJ	ENSMUSG00215001084	miRNA gene	Chr1:27659939-27660045 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005000511	miRNA gene	Chr1:27721437-27721543 (-)
CBA/J	ENSMUSG00210010953	miRNA gene	Chr1:27456182-27456288 (-)
DBA/2J	ENSMUSG00185016818	miRNA gene	Chr1:28515756-28515862 (-)
FVB/NJ	ENSMUSG00205007006	miRNA gene	Chr1:27599165-27599271 (-)
JF1/MsJ	ENSUMUG00000000981	miRNA gene	Chr5:87524081-87524184 (-)
JF1/MsJ	ENSUMUG00000018094	miRNA gene	Chr13:47054997-47055103 (+)
JF1/MsJ	ENSUMUG00000028505	miRNA gene	Chr3:42026333-42026439 (-)
JF1/MsJ	ENSUMUG00000024523	miRNA gene	Chr10:64666795-64666898 (+)
JF1/MsJ	ENSUMUG00000010251	miRNA gene	Chr6:140243245-140243343 (-)
JF1/MsJ	ENSUMUG00000021910	miRNA gene	Chr1:98511984-98512288 (-)
JF1/MsJ	ENSUMUG00000015453	miRNA gene	Chr8:40698998-40699103 (-)
JF1/MsJ	ENSUMUG00000009729	miRNA gene	Chr9:9668230-9668335 (+)
JF1/MsJ	ENSUMUG00000033571	miRNA gene	ChrX:62265395-62265496 (+)
LP/J	ENSMUSG00230000488	miRNA gene	Chr1:28527173-28527279 (-)
NOD/ShiLtJ	ENSMUSG00190000088	miRNA gene	Chr1:27589599-27589705 (-)
NZO/HlLtJ	ENSMUSG00225014485	miRNA gene	Chr1:31792384-31792490 (-)
PWK/PhJ	ENSLUMG00010034462	miRNA gene	Chr6:139322870-139322968 (-)
PWK/PhJ	ENSLUMG00010007537	miRNA gene	Chr5:80033773-80033876 (-)
PWK/PhJ	ENSLUMG00010010483	miRNA gene	Chr3:42095001-42095107 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005001993	miRNA gene	Chr1:27571172-27571278 (-)

Homology

• Gene Tree
  Gm55772
  

Sequences &
Gene Models

• All Sequences
  32

• Ensembl
  ENSMUSG00002075289 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075289	Ensembl Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	ENSMUST00020181977	Ensembl | MGI Sequence Detail	107	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;