Gm55769 Gene Detail

Summary

• Symbol
  Gm55769
• Name
  predicted gene, 55769

• Feature Type
  miRNA gene
• IDs
  MGI:6848004
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:29340561-29340660 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  185 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6848004	miRNA gene	Chr1:29340561-29340660 (+)
129S1/SvImJ	ENSMUSG00200000978	miRNA gene	Chr1:26822084-26822171 (+)
A/J	ENSMUSG00195000079	miRNA gene	Chr1:26575015-26575102 (+)
AKR/J	ENSMUSG00220000835	miRNA gene	Chr1:26623014-26623113 (+)
BALB/cJ	ENSMUSG00180001139	miRNA gene	Chr1:26661331-26661430 (+)
C3H/HeJ	ENSMUSG00175000700	miRNA gene	Chr1:26570798-26570885 (+)
C57BL/6NJ	ENSMUSG00215001063	miRNA gene	Chr1:26627134-26627233 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005000573	miRNA gene	Chr1:26697283-26697380 (+)
CBA/J	ENSMUSG00210010646	miRNA gene	Chr1:26429478-26429563 (+)
DBA/2J	ENSMUSG00185016525	miRNA gene	Chr1:27494370-27494457 (+)
FVB/NJ	ENSMUSG00205007328	miRNA gene	Chr1:26553054-26553141 (+)
JF1/MsJ	ENSUMUG00000000383	miRNA gene	Chr1:26645456-26645565 (+)
LP/J	ENSMUSG00230000589	miRNA gene	Chr1:27493659-27493746 (+)
NOD/ShiLtJ	ENSMUSG00190000126	miRNA gene	Chr1:26568291-26568378 (+)
NZO/HlLtJ	ENSMUSG00225000611	miRNA gene	Chr1:30763615-30763712 (+)
PWK/PhJ	ENSLUMG00010000212	miRNA gene	Chr1:26270466-26270573 (+)
SPRET/EiJ	ENSMSPG00010000855	miRNA gene	Chr1:27426322-27426417 (+)
WSB/EiJ	ENSIUOG00005001977	miRNA gene	Chr1:26548493-26548580 (+)

Homology

• Gene Tree
  Gm55769
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076857 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076857	Ensembl Gene Model | MGI Sequence Detail	100	C57BL/6J
transcript	ENSMUST00020182011	Ensembl | MGI Sequence Detail	100	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;