Gm55749 Gene Detail

Summary

• Symbol
  Gm55749
• Name
  predicted gene, 55749

• Feature Type
  miRNA gene
• IDs
  MGI:6847964
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:87350509-87350573 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847964	miRNA gene	Chr4:87350509-87350573 (+)
129S1/SvImJ	ENSMUSG00200010034	miRNA gene	Chr4:82346476-82346540 (+)
A/J	ENSMUSG00195009682	miRNA gene	Chr4:82908369-82908433 (+)
AKR/J	ENSMUSG00220020060	miRNA gene	Chr4:82272721-82272785 (+)
BALB/cJ	ENSMUSG00180006493	miRNA gene	Chr4:81873229-81873293 (+)
C3H/HeJ	ENSMUSG00175008414	miRNA gene	Chr4:82828891-82828955 (+)
C57BL/6NJ	ENSMUSG00215018718	miRNA gene	Chr4:82723783-82723847 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019423	miRNA gene	Chr4:82208010-82208067 (+)
CBA/J	ENSMUSG00210016810	miRNA gene	Chr4:82411515-82411579 (+)
DBA/2J	ENSMUSG00185003073	miRNA gene	Chr4:83000258-83000322 (+)
FVB/NJ	ENSMUSG00205001491	miRNA gene	Chr4:81242930-81242994 (+)
JF1/MsJ	ENSUMUG00000003816	miRNA gene	Chr4:83255467-83255524 (+)
LP/J	ENSMUSG00230018778	miRNA gene	Chr4:86420127-86420191 (+)
NOD/ShiLtJ	ENSMUSG00190018276	miRNA gene	Chr4:81802202-81802266 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010003478	miRNA gene	Chr4:81099652-81099709 (+)
SPRET/EiJ	ENSMSPG00010015861	miRNA gene	Chr4:82822871-82822922 (+)
WSB/EiJ	ENSIUOG00005013032	miRNA gene	Chr4:82209911-82209975 (+)

Homology

• Gene Tree
  Gm55749
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  2
• Endonuclease-mediated
  2
• Genomic Mutations
  2 involving Gm55749
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075661 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075661	Ensembl Gene Model | MGI Sequence Detail	65	C57BL/6J
transcript	ENSMUST00020182685	Ensembl | MGI Sequence Detail	65	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:235276 Saito M, et al., Identification of Stmm3 locus conferring resistance to late-stage chemically induced skin papillomas on mouse chromosome 4 by congenic mapping and allele-specific alteration analysis. Exp Anim. 2014;63(3):339-48