Gm55684 Gene Detail

Summary

• Symbol
  Gm55684
• Name
  predicted gene, 55684

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6847835
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:85828148-85828424 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  108 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847835	unclassified non-coding RNA gene	Chr4:85828148-85828424 (+)
129S1/SvImJ	ENSMUSG00200001099	unclassified non-coding RNA gene	Chr4:80765679-80765955 (+)
A/J	ENSMUSG00195006216	unclassified non-coding RNA gene	Chr4:81348804-81349080 (+)
AKR/J	ENSMUSG00220008169	unclassified non-coding RNA gene	Chr4:80747999-80748275 (+)
BALB/cJ	ENSMUSG00180008586	unclassified non-coding RNA gene	Chr4:80313777-80314053 (+)
C3H/HeJ	ENSMUSG00175004183	unclassified non-coding RNA gene	Chr4:81243904-81244180 (+)
C57BL/6NJ	ENSMUSG00215002388	unclassified non-coding RNA gene	Chr4:81200477-81200753 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005001027	unclassified non-coding RNA gene	Chr4:80668530-80668806 (+)
CBA/J	ENSMUSG00210001377	unclassified non-coding RNA gene	Chr4:80830784-80831060 (+)
DBA/2J	ENSMUSG00185000810	unclassified non-coding RNA gene	Chr4:81426695-81426971 (+)
FVB/NJ	ENSMUSG00205001539	unclassified non-coding RNA gene	Chr4:79714483-79714759 (+)
JF1/MsJ	ENSUMUG00000032361	unclassified non-coding RNA gene	Chr4:81724328-81724604 (+)
LP/J	ENSMUSG00230018668	unclassified non-coding RNA gene	Chr4:84847022-84847298 (+)
NOD/ShiLtJ	ENSMUSG00190000968	unclassified non-coding RNA gene	Chr4:80279010-80279286 (+)
NZO/HlLtJ	ENSMUSG00225005732	unclassified non-coding RNA gene	Chr4:89947553-89947829 (+)
PWK/PhJ	ENSLUMG00010001727	unclassified non-coding RNA gene	Chr4:79570583-79570859 (+)
SPRET/EiJ	ENSMSPG00010008167	unclassified non-coding RNA gene	Chr4:81299975-81300251 (+)
WSB/EiJ	ENSIUOG00005010038	unclassified non-coding RNA gene	Chr4:80737167-80737174 (+)

Homology

• Gene Tree
  Gm55684
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074882 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074882	Ensembl Gene Model | MGI Sequence Detail	277	C57BL/6J
transcript	ENSMUST00020181864	Ensembl | MGI Sequence Detail	277	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;