Gm55678 Gene Detail

Summary

• Symbol
  Gm55678
• Name
  predicted gene, 55678

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6847823
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:112363373-112363733 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  87 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847823	unclassified non-coding RNA gene	Chr5:112363373-112363733 (-)
129S1/SvImJ	ENSMUSG00200024077	unclassified non-coding RNA gene	Chr5:106104741-106105101 (-)
A/J	ENSMUSG00195041932	unclassified non-coding RNA gene	Chr5:105613382-105613742 (-)
AKR/J	ENSMUSG00220051758	unclassified non-coding RNA gene	Chr5:105124079-105124439 (-)
BALB/cJ	ENSMUSG00180047851	unclassified non-coding RNA gene	Chr5:105754810-105755170 (-)
C3H/HeJ	ENSMUSG00175050336	unclassified non-coding RNA gene	Chr5:107736303-107736663 (-)
C57BL/6NJ	ENSMUSG00215035499	unclassified non-coding RNA gene	Chr5:105761787-105762147 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035200	unclassified non-coding RNA gene	Chr5:104937380-104937740 (-)
CBA/J	ENSMUSG00210044315	unclassified non-coding RNA gene	Chr5:106488390-106488750 (-)
DBA/2J	ENSMUSG00185049039	unclassified non-coding RNA gene	Chr5:109523596-109523956 (-)
FVB/NJ	ENSMUSG00205052988	unclassified non-coding RNA gene	Chr5:105392552-105392912 (-)
JF1/MsJ	ENSUMUG00000053857	unclassified non-coding RNA gene	Chr5:112375481-112375841 (-)
LP/J	ENSMUSG00230049706	unclassified non-coding RNA gene	Chr5:113643090-113643450 (-)
NOD/ShiLtJ	ENSMUSG00190049636	unclassified non-coding RNA gene	Chr5:105428613-105428973 (-)
NZO/HlLtJ	ENSMUSG00225025912	unclassified non-coding RNA gene	Chr5:121279530-121279890 (-)
PWK/PhJ	ENSLUMG00010038938	unclassified non-coding RNA gene	Chr5:104285079-104285439 (-)
SPRET/EiJ	ENSMSPG00010047712	unclassified non-coding RNA gene	Chr5:107544908-107545268 (-)
WSB/EiJ	ENSIUOG00005047206	unclassified non-coding RNA gene	Chr5:108129404-108129764 (-)

Homology

• Gene Tree
  Gm55678
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074930 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074930	Ensembl Gene Model | MGI Sequence Detail	361	C57BL/6J
transcript	ENSMUST00020182326	Ensembl | MGI Sequence Detail	361	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;