Gm55654 Gene Detail

Summary

• Symbol
  Gm55654
• Name
  predicted gene, 55654

• Feature Type
  miRNA gene
• IDs
  MGI:6847775
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:45520951-45521076 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847775	miRNA gene	Chr17:45520951-45521076 (+)
129S1/SvImJ	ENSMUSG00200028144	miRNA gene	Chr17:40728262-40728387 (+)
A/J	ENSMUSG00195021949	miRNA gene	Chr17:42224914-42225039 (+)
AKR/J	ENSMUSG00220036531	miRNA gene	Chr17:41196595-41196720 (+)
BALB/cJ	ENSMUSG00180026515	miRNA gene	Chr17:41963285-41963410 (+)
C3H/HeJ	ENSMUSG00175016149	miRNA gene	Chr17:41277376-41277501 (+)
C57BL/6NJ	ENSMUSG00215037583	miRNA gene	Chr17:40842809-40842934 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005026229	miRNA gene	Chr17:42018634-42018759 (+)
CBA/J	ENSMUSG00210039275	miRNA gene	Chr17:41027134-41027259 (+)
DBA/2J	ENSMUSG00185030866	miRNA gene	Chr17:43944222-43944347 (+)
FVB/NJ	ENSMUSG00205052647	miRNA gene	Chr17:41512456-41512581 (+)
JF1/MsJ	ENSUMUG00000040225	miRNA gene	Chr17:43552984-43553109 (+)
LP/J	ENSMUSG00230041875	miRNA gene	Chr17:44829865-44829990 (+)
NOD/ShiLtJ	ENSMUSG00190017690	miRNA gene	Chr17:40916078-40916203 (+)
NZO/HlLtJ	ENSMUSG00225044172	miRNA gene	Chr17:47082811-47082936 (+)
PWK/PhJ	ENSLUMG00010035574	miRNA gene	Chr17:40787086-40787211 (+)
SPRET/EiJ	ENSMSPG00010037182	miRNA gene	Chr17:40997619-40997744 (+)
WSB/EiJ	ENSIUOG00005028552	miRNA gene	Chr17:41888921-41889046 (+)

Homology

• Gene Tree
  Gm55654
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076663 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076663	Ensembl Gene Model | MGI Sequence Detail	126	C57BL/6J
transcript	ENSMUST00020182538	Ensembl | MGI Sequence Detail	126	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;