Gm55647 Gene Detail

Summary

• Symbol
  Gm55647
• Name
  predicted gene, 55647

• Feature Type
  rRNA gene
• IDs
  MGI:6847762
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:44951912-44952030 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  115 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847762	rRNA gene	Chr17:44951912-44952030 (-)
129S1/SvImJ	ENSMUSG00200052299	rRNA gene	Chr17:40156206-40156324 (-)
A/J	ENSMUSG00195023079	rRNA gene	Chr17:41657989-41658107 (-)
AKR/J	ENSMUSG00220052967	rRNA gene	Chr17:40626694-40626812 (-)
BALB/cJ	ENSMUSG00180025702	rRNA gene	Chr17:41394189-41394307 (-)
C3H/HeJ	ENSMUSG00175016980	rRNA gene	Chr17:40708276-40708394 (-)
C57BL/6NJ	ENSMUSG00215053861	rRNA gene	Chr17:40272392-40272510 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005026512	rRNA gene	Chr17:41454561-41454679 (-)
CBA/J	ENSMUSG00210052483	rRNA gene	Chr17:40458032-40458150 (-)
DBA/2J	ENSMUSG00185030918	rRNA gene	Chr17:43374929-43375047 (-)
FVB/NJ	ENSMUSG00205053339	rRNA gene	Chr17:40941000-40941118 (-)
JF1/MsJ	ENSUMUG00000036816	rRNA gene	Chr17:43001445-43001563 (-)
LP/J	ENSMUSG00230041839	rRNA gene	Chr17:44268277-44268395 (-)
NOD/ShiLtJ	ENSMUSG00190053867	rRNA gene	Chr17:40351667-40351785 (-)
NZO/HlLtJ	ENSMUSG00225044045	rRNA gene	Chr17:46520267-46520385 (-)
PWK/PhJ	ENSLUMG00010046934	rRNA gene	Chr17:40236236-40236354 (-)
SPRET/EiJ	ENSMSPG00010051373	rRNA gene	Chr17:40438960-40439078 (-)
WSB/EiJ	ENSIUOG00005028686	rRNA gene	Chr17:41322115-41322233 (-)

Homology

• Gene Tree
  Gm55647
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074949 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074949	Ensembl Gene Model | MGI Sequence Detail	119	C57BL/6J
transcript	ENSMUST00020182614	Ensembl | MGI Sequence Detail	119	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;