Gm55646 Gene Detail

Summary

• Symbol
  Gm55646
• Name
  predicted gene, 55646

• Feature Type
  miRNA gene
• IDs
  MGI:6847760
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:23867518-23867655 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  134 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847760	miRNA gene	Chr13:23867518-23867655 (+)
129S1/SvImJ	ENSMUSG00200032855	miRNA gene	Chr13:20998183-20998320 (+)
A/J	ENSMUSG00195040329	miRNA gene	Chr13:20147345-20147482 (+)
AKR/J	ENSMUSG00220033460	miRNA gene	Chr13:19968514-19968651 (+)
BALB/cJ	ENSMUSG00180024883	miRNA gene	Chr13:20465884-20466021 (+)
C3H/HeJ	ENSMUSG00175033467	miRNA gene	Chr13:20472091-20472228 (+)
C57BL/6NJ	ENSMUSG00215013054	miRNA gene	Chr13:20624736-20624873 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010503	miRNA gene	Chr13:20643519-20643656 (+)
CBA/J	ENSMUSG00210027085	miRNA gene	Chr13:20427389-20427526 (+)
DBA/2J	ENSMUSG00185021496	miRNA gene	Chr13:21249382-21249519 (+)
FVB/NJ	ENSMUSG00205028671	miRNA gene	Chr13:20267790-20267927 (+)
JF1/MsJ	ENSUMUG00000016014	miRNA gene	Chr13:20904628-20904765 (+)
LP/J	ENSMUSG00230022151	miRNA gene	Chr13:30571098-30571235 (+)
NOD/ShiLtJ	ENSMUSG00190036166	miRNA gene	Chr13:20242324-20242461 (+)
NZO/HlLtJ	ENSMUSG00225045647	miRNA gene	Chr13:24361815-24361952 (+)
PWK/PhJ	ENSLUMG00010032609	miRNA gene	Chr13:19802906-19803043 (+)
SPRET/EiJ	ENSMSPG00010019856	miRNA gene	Chr13:19569396-19569533 (+)
WSB/EiJ	ENSIUOG00005035974	miRNA gene	Chr13:19769128-19769265 (+)

Homology

• Gene Tree
  Gm55646
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076196 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076196	Ensembl Gene Model | MGI Sequence Detail	138	C57BL/6J
transcript	ENSMUST00020182657	Ensembl | MGI Sequence Detail	138	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;