Gm55632 Gene Detail

Summary

• Symbol
  Gm55632
• Name
  predicted gene, 55632

• Feature Type
  miRNA gene
• IDs
  MGI:6847732
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:21504365-21504474 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  67

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847732	miRNA gene	Chr17:21504365-21504474 (-)
129S1/SvImJ	ENSMUSG00200049311	miRNA gene	Chr2:37442127-37442265 (+)
129S1/SvImJ	ENSMUSG00200038774	miRNA gene	Chr17:17046895-17047004 (-)
129S1/SvImJ	ENSMUSG00200030069	miRNA gene	Chr12:99881122-99881240 (+)
129S1/SvImJ	ENSMUSG00200007170	miRNA gene	Chr3:35083704-35083813 (+)
A/J	ENSMUSG00195001556	miRNA gene	Chr3:35042044-35042153 (+)
A/J	ENSMUSG00195039215	miRNA gene	Chr17:17911167-17911276 (-)
A/J	ENSMUSG00195051062	miRNA gene	Chr12:102441488-102441625 (+)
A/J	ENSMUSG00195042775	miRNA gene	Chr13:11590762-11590908 (+)
AKR/J	ENSMUSG00220000968	miRNA gene	Chr3:35113162-35113271 (+)
AKR/J	ENSMUSG00220045372	miRNA gene	Chr12:100317490-100317616 (+)
AKR/J	ENSMUSG00220036854	miRNA gene	Chr13:11587675-11587818 (+)
AKR/J	ENSMUSG00220026397	miRNA gene	Chr17:17124052-17124161 (-)
BALB/cJ	ENSMUSG00180040369	miRNA gene	Chr13:11940374-11940521 (+)
BALB/cJ	ENSMUSG00180050302	miRNA gene	Chr2:37552412-37552554 (+)
BALB/cJ	ENSMUSG00180053335	miRNA gene	Chr12:101644159-101644277 (+)
BALB/cJ	ENSMUSG00180018155	miRNA gene	Chr17:17201419-17201528 (-)
C3H/HeJ	ENSMUSG00175044302	miRNA gene	Chr17:16972500-16972609 (-)
C3H/HeJ	ENSMUSG00175051130	miRNA gene	Chr12:104257044-104257170 (+)
C3H/HeJ	ENSMUSG00175039107	miRNA gene	Chr13:12041674-12041821 (+)
C3H/HeJ	ENSMUSG00175003988	miRNA gene	Chr3:35074424-35074533 (+)
C57BL/6NJ	ENSMUSG00215042738	miRNA gene	Chr12:100917130-100917248 (+)
C57BL/6NJ	ENSMUSG00215043375	miRNA gene	Chr17:16996654-16996763 (-)
C57BL/6NJ	ENSMUSG00215047960	miRNA gene	Chr2:37598810-37598952 (+)
C57BL/6NJ	ENSMUSG00215037694	miRNA gene	Chr13:12048793-12048939 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023513	miRNA gene	Chr17:17562697-17562805 (-)
CAST/EiJ	ENSTCUG00005018339	miRNA gene	Chr2:37247847-37247983 (+)
CAST/EiJ	ENSTCUG00005033983	miRNA gene	Chr16:31129690-31129840 (-)
CBA/J	ENSMUSG00210002125	miRNA gene	Chr3:35129478-35129587 (+)
CBA/J	ENSMUSG00210050952	miRNA gene	Chr19:4985628-4985736 (-)
CBA/J	ENSMUSG00210040876	miRNA gene	Chr17:16780414-16780523 (-)
CBA/J	ENSMUSG00210032787	miRNA gene	Chr13:11907287-11907433 (+)
CBA/J	ENSMUSG00210015256	miRNA gene	Chr12:101318841-101318967 (+)
DBA/2J	ENSMUSG00185015100	miRNA gene	Chr13:12602041-12602187 (+)
DBA/2J	ENSMUSG00185039985	miRNA gene	Chr17:19007607-19007716 (-)
DBA/2J	ENSMUSG00185001923	miRNA gene	Chr3:35342380-35342489 (+)
FVB/NJ	ENSMUSG00205022915	miRNA gene	Chr12:100323547-100323684 (+)
FVB/NJ	ENSMUSG00205034179	miRNA gene	Chr17:17496479-17496588 (-)
JF1/MsJ	ENSUMUG00000033266	miRNA gene	Chr16:48295408-48295568 (-)
JF1/MsJ	ENSUMUG00000038367	miRNA gene	Chr17:18187230-18187338 (-)
JF1/MsJ	ENSUMUG00000056991	miRNA gene	Chr19:5567048-5567156 (-)
JF1/MsJ	ENSUMUG00000042526	miRNA gene	Chr12:107861050-107861174 (+)
JF1/MsJ	ENSUMUG00000025645	miRNA gene	Chr13:12414549-12414700 (+)
JF1/MsJ	ENSUMUG00000016571	miRNA gene	Chr2:37331785-37331902 (+)
JF1/MsJ	ENSUMUG00000056990	miRNA gene	Chr19:5292288-5292396 (-)
LP/J	ENSMUSG00230037272	miRNA gene	Chr13:22010997-22011143 (+)
LP/J	ENSMUSG00230033039	miRNA gene	Chr12:110146104-110146222 (+)
LP/J	ENSMUSG00230027351	miRNA gene	Chr17:20405617-20405726 (-)
LP/J	ENSMUSG00230024821	miRNA gene	Chr3:37328765-37328874 (+)
NOD/ShiLtJ	ENSMUSG00190026469	miRNA gene	Chr13:11907038-11907185 (+)
NOD/ShiLtJ	ENSMUSG00190041345	miRNA gene	Chr12:84896324-84896450 (-)
NOD/ShiLtJ	ENSMUSG00190041789	miRNA gene	Chr17:17163040-17163149 (-)
NOD/ShiLtJ	ENSMUSG00190002173	miRNA gene	Chr3:35380203-35380312 (+)
NZO/HlLtJ	ENSMUSG00225039913	miRNA gene	Chr12:111896667-111896804 (+)
NZO/HlLtJ	ENSMUSG00225054791	miRNA gene	Chr17:22328655-22328764 (-)
NZO/HlLtJ	ENSMUSG00225032856	miRNA gene	Chr13:15785392-15785549 (+)
NZO/HlLtJ	ENSMUSG00225007579	miRNA gene	Chr3:39949746-39949855 (+)
PWK/PhJ	ENSLUMG00010052318	miRNA gene	Chr12:101337877-101338004 (+)
PWK/PhJ	ENSLUMG00010020698	miRNA gene	Chr17:16443080-16443189 (-)
PWK/PhJ	ENSLUMG00010009450	miRNA gene	Chr19:5035702-5035810 (-)
PWK/PhJ	ENSLUMG00010046227	miRNA gene	Chr2:37496709-37496828 (+)
PWK/PhJ	ENSLUMG00010031543	miRNA gene	Chr16:30918223-30918381 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005014747	miRNA gene	Chr3:35379181-35379290 (+)
WSB/EiJ	ENSIUOG00005038535	miRNA gene	Chr13:11253198-11253354 (+)
WSB/EiJ	ENSIUOG00005042763	miRNA gene	Chr17:17759737-17759846 (-)
WSB/EiJ	ENSIUOG00005043736	miRNA gene	Chr2:37428990-37429128 (+)
WSB/EiJ	ENSIUOG00005018905	miRNA gene	Chr14:86464983-86465140 (-)

Homology

• Gene Tree
  Gm55632
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  16 phenotype references
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm55632
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  69

• Ensembl
  ENSMUSG00002075486 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075486	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020183150	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 17

  Phenotypes 16
• Earliest
  J:84774 Dunn LC, Studies of the genetic variability in populations of wild house mice. II. Analysis of eight additional alleles at locus T. Genetics. 1957;42:299-311
• Latest
  J:273736 Charron Y, et al., Two isoforms of the RAC-specific guanine nucleotide exchange factor TIAM2 act oppositely on transmission ratio distortion by the mouse t-haplotype. PLoS Genet. 2019 Feb;15(2):e1007964