Gm55621 Gene Detail

Summary

• Symbol
  Gm55621
• Name
  predicted gene, 55621

• Feature Type
  snRNA gene
• IDs
  MGI:6847710
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:103999697-103999798 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  72 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847710	snRNA gene	Chr3:103999697-103999798 (+)
129S1/SvImJ	ENSMUSG00200046259	snRNA gene	Chr3:100612280-100612381 (+)
A/J	ENSMUSG00195049386	snRNA gene	Chr3:101025868-101025969 (+)
AKR/J	ENSMUSG00220044524	snRNA gene	Chr3:99385902-99386003 (+)
BALB/cJ	ENSMUSG00180044680	snRNA gene	Chr3:100953888-100953989 (+)
C3H/HeJ	ENSMUSG00175032864	snRNA gene	Chr3:100508177-100508278 (+)
C57BL/6NJ	ENSMUSG00215036122	snRNA gene	Chr3:101269788-101269889 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005021802	snRNA gene	Chr3:101232343-101232444 (+)
CBA/J	ENSMUSG00210051886	snRNA gene	Chr3:101130210-101130311 (+)
DBA/2J	ENSMUSG00185023414	snRNA gene	Chr3:101605964-101606065 (+)
FVB/NJ	ENSMUSG00205032361	snRNA gene	Chr3:100190942-100191043 (+)
JF1/MsJ	ENSUMUG00000052492	snRNA gene	Chr3:100365149-100365250 (+)
LP/J	ENSMUSG00230020497	snRNA gene	Chr3:103540598-103540699 (+)
NOD/ShiLtJ	ENSMUSG00190050509	snRNA gene	Chr3:101805877-101805978 (+)
NZO/HlLtJ	ENSMUSG00225020024	snRNA gene	Chr3:106007642-106007743 (+)
PWK/PhJ	ENSLUMG00010032505	snRNA gene	Chr3:100434989-100435090 (+)
SPRET/EiJ	ENSMSPG00010047746	snRNA gene	Chr3:100643073-100643174 (+)
WSB/EiJ	ENSIUOG00005034536	snRNA gene	Chr3:101151035-101151136 (+)

Homology

• Gene Tree
  Gm55621
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076048 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076048	Ensembl Gene Model | MGI Sequence Detail	102	C57BL/6J
transcript	ENSMUST00020182613	Ensembl | MGI Sequence Detail	102	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;